RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 RAG2P55895 527 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 RBMS2Q15434 407 aaKnown RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 SPINK14Q6IE38 97 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 GLDNQ6ZMI3 551 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 GTPBP8Q8N3Z3 284 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 FADS6Q8N9I5 356 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 CT55Q8WUE5 264 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 ZBTB8AQ96BR9 441 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 SFXN2Q96NB2 322 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 ULBP2Q9BZM5 246 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 PROK2Q9HC23 129 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 R4GN57 208 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 MEIKINA0A087WXM9 373 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 LOC102723996A0A087X1L8 192 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 ZNF736B4DX44 427 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 GOSR2O14653 212 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 IGFBP3P17936 291 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 DSCR4P56555 118 aaPredicted RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 C21orf62-AS1Q17RA5 79 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 SLC25A53Q5H9E4 307 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 SLC23A3Q6PIS1 610 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 DEGS2Q6QHC5 323 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 ZNF584Q8IVC4 421 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 OR10K1Q8NGX5 313 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 RBM14Q96PK6 669 aaKnown RBP9.68□□□□□ -0.86
DDX56-203ENST00000421223 NICN1Q9BSH3 213 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 C12orf4Q9NQ89 552 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 CPAMD8Q8IZJ3 1885 aa9.68□□□□□ -0.86
DDX56-203ENST00000421223 CXCL13O43927 109 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 MLF1P58340 268 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 Q0VFX4 171 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDX56-203ENST00000421223 C2orf68Q2NKX9 166 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 LIN54Q6MZP7 749 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 SLC25A47Q6Q0C1 308 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 GLIPR1L1Q6UWM5 242 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 C6orf15Q6UXA7 325 aaPredicted RBP9.67□□□□□ -0.86
DDX56-203ENST00000421223 TRAPPC6BQ86SZ2 158 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 ALKBH3Q96Q83 286 aaPredicted RBP9.67□□□□□ -0.86
DDX56-203ENST00000421223 ANGPTL4Q9BY76 406 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 ZNF407Q9C0G0 2248 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 P4HTMQ9NXG6 502 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 TAS2R8Q9NYW2 309 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 FBXO4Q9UKT5 387 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 IGLV3-32A0A0A0MS00 114 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 A0A1B0GUH1 482 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 E9PLN8 166 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 DKK1O94907 266 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 GDF1P27539 372 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 OR3A4PP47883 348 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 CXADRP78310 365 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 PCK2Q16822 640 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 LGALSLQ3ZCW2 172 aaPredicted RBP9.67□□□□□ -0.86
DDX56-203ENST00000421223 ZNF813Q6ZN06 617 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 LINC00696Q6ZRV3 163 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 PPP1R32Q7Z5V6 425 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 FJX1Q86VR8 437 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 SLC22A24Q8N4F4 322 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 TMEM104Q8NE00 496 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 M1APQ8TC57 530 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 THOC3Q96J01 351 aaKnown RBP9.67□□□□□ -0.86
DDX56-203ENST00000421223 SRXN1Q9BYN0 137 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 POFUT1Q9H488 388 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 COQ3Q9NZJ6 369 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 SCP2D1Q9UJQ7 156 aa9.67□□□□□ -0.86
DDX56-203ENST00000421223 FXYD6-FXYD2A0A087WZ82 144 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 LNP1A1A4G5 178 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PRAF2O60831 178 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CRTAPO75718 401 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 CBR3O75828 277 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ISG15P05161 165 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 LPLP06858 475 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 OR3A3P47888 321 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 RGS19P49795 217 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 P2RX3P56373 397 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PER3P56645 1201 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CARD18P57730 90 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ACTBP60709 375 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ACTG1P63261 375 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CHAF1BQ13112 559 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 POU4F3Q15319 338 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ACER2Q5QJU3 275 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ELFN2Q5R3F8 820 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ZBTB37Q5TC79 503 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 OLFML2AQ68BL7 652 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 FAM166AQ6J272 317 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ZNF600Q6ZNG1 722 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 BEST3Q8N1M1 668 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 MUC20Q8N307 709 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 DTWD2Q8NBA8 298 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 OR9K2Q8NGE7 335 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PAQR8Q8TEZ7 354 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ELMOD3Q96FG2 381 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 FXYD6Q9H0Q3 95 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CLEC4MQ9H2X3 399 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 IFT46Q9NQC8 304 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms