RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 WACQ9BTA9 647 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 AKIP1Q9NQ31 210 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF275Q9NSD4 429 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-204ENST00000409727 CMAHPQ9Y471 501 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 TLN1Q9Y490 2541 aaKnown RBP10.84□□□□□ -0.67
CHMP3-204ENST00000409727 NOTOA8MTQ0 251 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 CLDN25C9JDP6 229 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 HPGDSO60760 199 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 CNOT4O95628 575 aaKnown RBP10.83□□□□□ -0.68
CHMP3-204ENST00000409727 HOXD4P09016 255 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-204ENST00000409727 EPXP11678 715 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF20P17024 532 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ATF1P18846 271 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 CLDN12P56749 244 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 RBPJQ06330 500 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 SPOCK1Q08629 439 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 GABRA6Q16445 453 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 DMRTC1Q5HYR2 192 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF584Q8IVC4 421 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 THRSPQ92748 146 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 PLEKHA1Q9HB21 404 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 HMG20AQ9NP66 347 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF835Q9Y2P0 537 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 V9GY05 133 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 INTS1Q8N201 2190 aaKnown RBP10.83□□□□□ -0.68
CHMP3-204ENST00000409727 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
CHMP3-204ENST00000409727 CRHP06850 196 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 EDN3P14138 238 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
CHMP3-204ENST00000409727 COX5AP20674 150 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 HOXC12P31275 282 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 TNFSF8P32971 234 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 THBS2P35442 1172 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 KRTAP27-1Q3LI81 207 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 ALKBH2Q6NS38 261 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 DOK3Q7L591 496 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 SGK3Q96BR1 496 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 REEP6Q96HR9 211 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 OR51B6Q9H340 312 aa10.83□□□□□ -0.68
CHMP3-204ENST00000409727 TRGV8A0A0C4DH27 118 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 A0A0G2JNJ9 132 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 IFITM5A6NNB3 132 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 AGFG2O95081 481 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 CELA3BP08861 270 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 CEACAM8P31997 349 aaPredicted RBP10.82□□□□□ -0.68
CHMP3-204ENST00000409727 APLNRP35414 380 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 PPP3R1P63098 170 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 EIF2S3LQ2VIR3 472 aaKnown RBP10.82□□□□□ -0.68
CHMP3-204ENST00000409727 GLYATL3Q5SZD4 288 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 MZT2AQ6P582 158 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
CHMP3-204ENST00000409727 BEND4Q6ZU67 534 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 MFSD4AQ8N468 514 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF671Q8TAW3 534 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 TRMT10AQ8TBZ6 339 aaKnown RBP10.82□□□□□ -0.68
CHMP3-204ENST00000409727 ZFP3Q96NJ6 502 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 SFXN3Q9BWM7 321 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 MIXL1Q9H2W2 232 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 PLGRKTQ9HBL7 147 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 B3GNT2Q9NY97 397 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 Q9UFV3 132 aa10.82□□□□□ -0.68
CHMP3-204ENST00000409727 A0A0U1RQV5 110 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 IGFBP3P17936 291 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 CFL1P23528 166 aaKnown RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 IDH3GP51553 393 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 BHLHA15Q7RTS1 189 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 MYPOPQ86VE0 399 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 SNX29P2Q8IUI4 249 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 CROCCP3Q8IVE0 287 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 PAQR4Q8N4S7 273 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 SAMD12Q8N8I0 201 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 DTX3Q8N9I9 347 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 SLC30A7Q8NEW0 376 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 OR13C9Q8NGT0 318 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 OR14K1Q8NGZ2 314 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 ZFAND2BQ8WV99 257 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 DIRAS2Q96HU8 199 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 WDR12Q9GZL7 423 aaKnown RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 CGGBP1Q9UFW8 167 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-204ENST00000409727 FOXJ3Q9UPW0 622 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 ATRXP46100 2492 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 FAM25AB3EWG3 89 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 FAM25CB3EWG5 89 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 FAM25GB3EWG6 89 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 AIPO00170 330 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 DHRS3O75911 302 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 SFTPCP11686 197 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms