RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 XRCC2O43543 280 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 RPS23P62266 143 aaKnown RBP12.46□□□□□ -0.42
VAPA-202ENST00000400000 ZNF90Q03938 601 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 ZNF266Q14584 549 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 ZNF766Q5HY98 468 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 OR5M8Q8NGP6 311 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 BLNKQ8WV28 456 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 SARAFQ96BY9 339 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 NTN4Q9HB63 628 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 SLCO1C1Q9NYB5 712 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 UBE2L5PA0A1B0GUS4 154 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 ETHE1O95571 254 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 FGF7P21781 194 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 H3F3AP84243 136 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 C5orf46Q6UWT4 87 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
VAPA-202ENST00000400000 YBX2Q9Y2T7 364 aaKnown RBP12.45□□□□□ -0.42
VAPA-202ENST00000400000 RGPD1P0DJD0 1748 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
VAPA-202ENST00000400000 IHHQ14623 411 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 ADAM5Q6NVV9 412 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 TSEN54Q7Z6J9 526 aaKnown RBP12.45□□□□□ -0.42
VAPA-202ENST00000400000 SFTPA1Q8IWL2 248 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 KDF1Q8NAX2 398 aaPredicted RBP12.45□□□□□ -0.42
VAPA-202ENST00000400000 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 DOK5Q9P104 306 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 CD22P20273 847 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 RFX2P48378 723 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 GATA6Q92908 595 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 STACQ99469 402 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 PSENENQ9NZ42 101 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 LRP3O75074 770 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 SDHAP31040 664 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 SYT14P1Q58G82 188 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 FUNDC1Q8IVP5 155 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 ADH4P08319 380 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 RFESDQ8TAC1 157 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 DDOQ99489 341 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 OR6C68A6NDL8 312 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 OR2C1O95371 312 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 PATE4P0C8F1 98 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 HOXD12P35452 270 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 C12orf10Q9HB07 376 aa12.45□□□□□ -0.42
VAPA-202ENST00000400000 CEACAM16Q2WEN9 425 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 THEM4Q5T1C6 240 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 OR6K3Q8NGY3 331 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 SLCO5A1Q9H2Y9 848 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 ST3GAL6Q9Y274 331 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 B3GALT5Q9Y2C3 310 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 CYTIPO60759 359 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 CELA2BP08218 269 aaPredicted RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 SLC25A4P12235 298 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 SPACA1Q9HBV2 294 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 PMS2P1A4D2B8 440 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 ATP1B1P05026 303 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 SMIM17P0DL12 118 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 ARNTP27540 789 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 RHOXF1Q8NHV9 184 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 MARCH1Q8TCQ1 289 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 NDRG4Q9ULP0 352 aaKnown RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 PPM1DO15297 605 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 MPGP29372 298 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 CLDN22Q8N7P3 220 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 SLC38A9Q8NBW4 561 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 BTAF1O14981 1849 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 TRGV5A0A0B4J1U4 118 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 GABRG2P18507 467 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 OR3A4PP47883 348 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 DEFA6Q01524 100 aa12.44□□□□□ -0.42
VAPA-202ENST00000400000 DDX60Q8IY21 1712 aaKnown RBP12.44□□□□□ -0.42
VAPA-202ENST00000400000 F5H697 171 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 S100A4P26447 101 aaKnown RBP12.43□□□□□ -0.42
VAPA-202ENST00000400000 PIGPP57054 158 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 B3GNT9Q6UX72 402 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 RXFP4Q8TDU9 374 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 SYT11Q9BT88 431 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 AUNIPQ9H7T9 357 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 KCNE3Q9Y6H6 103 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 UBL3O95164 117 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ZNF573Q86YE8 665 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms