RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 A8MVM7 634 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 H2BFMP0C1H6 154 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 SFTA3P0C7M3 94 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 PTGFRP43088 359 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 PTCRAQ6ISU1 281 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-202ENST00000375299 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-202ENST00000375299 OR2I1PQ8NGU4 316 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 RELTQ969Z4 430 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 SLC5A6Q9Y289 635 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 USP34Q70CQ2 3546 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 TMEM14DPA8MWL7 114 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 RNASEK-C17orf49H0YIS7 233 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 ACAA1P09110 424 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-202ENST00000375299 HLA-DOBP13765 273 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 CTHP32929 405 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 RAB5BP61020 215 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 PCK2Q16822 640 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 CLEC18BQ6UXF7 455 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 TMEM200AQ86VY9 491 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 TMEM151BQ8IW70 566 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 ADAT3Q96EY9 351 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-202ENST00000375299 NICN1Q9BSH3 213 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 SLC5A7Q9GZV3 580 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 CENPMQ9NSP4 180 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 FBLN5Q9UBX5 448 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 ANAPC10Q9UM13 185 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 A0A1W2PQD3 144 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 MMP16P51512 607 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 FMODQ06828 376 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 VAX1Q5SQQ9 334 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 DNM1P34Q6PK57 102 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 MISPQ8IVT2 679 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 MAP3K3Q99759 626 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 NRSN2Q9GZP1 204 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 SEC61A2Q9H9S3 476 aa18.81■□□□□ 0.6
UPF3A-202ENST00000375299 CDC14CA4D256 554 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 CEACAM18A8MTB9 384 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 ALG1L2C9J202 215 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 AHSA1O95433 338 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 TTRP02766 147 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 EMP2P54851 167 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 HABP2Q14520 560 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-202ENST00000375299 COX15Q7KZN9 410 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 ARRDC1Q8N5I2 433 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 TCTN2Q96GX1 697 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 TBL1XR1Q9BZK7 514 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 OR11A1Q9GZK7 315 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 FAM206AQ9NX38 181 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 PRR13Q9NZ81 148 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 EDARQ9UNE0 448 aa18.8■□□□□ 0.6
UPF3A-202ENST00000375299 ARID1BQ8NFD5 2236 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-202ENST00000375299 SOX1O00570 391 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-202ENST00000375299 CSTBP04080 98 aaKnown RBP18.79■□□□□ 0.6
UPF3A-202ENST00000375299 CD1CP29017 333 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 NPY4RP50391 375 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 ACTBL2Q562R1 376 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 KDM8Q8N371 416 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 LANCL2Q9NS86 450 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 SYT7O43581 403 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF217O75362 1048 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 CHRM2P08172 466 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 LPAR6P43657 344 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 EIF5AP63241 154 aaKnown RBP18.79■□□□□ 0.6
UPF3A-202ENST00000375299 C1orf61Q13536 156 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 SLC29A4Q7RTT9 530 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 ANGPTL5Q86XS5 388 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 OR13C9Q8NGT0 318 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 RNF133Q8WVZ7 376 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 LPAR5Q9H1C0 372 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 SMCO4Q9NRQ5 59 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 SLC22A11Q9NSA0 550 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 DNAJB11Q9UBS4 358 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 PCDHGA1Q9Y5H4 931 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 HS3ST3A1Q9Y663 406 aa18.79■□□□□ 0.6
UPF3A-202ENST00000375299 A6NIZ1 184 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 MED6O75586 246 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 IGKV3-11P04433 115 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 PAX6P26367 422 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 RABIFP47224 123 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 RAP1BP61224 184 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 SNRPEP62304 92 aaKnown RBP18.78■□□□□ 0.6
UPF3A-202ENST00000375299 RAP1AP62834 184 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 HYAL1Q12794 435 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ELAVL1Q15717 326 aaKnown RBP18.78■□□□□ 0.6
UPF3A-202ENST00000375299 EIF5AL1Q6IS14 154 aaKnown RBP18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF101Q8IZC7 436 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 OR51F2Q8NH61 342 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF721Q8TF20 911 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ASB10Q8WXI3 467 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF285Q96NJ3 590 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 FOXQ1Q9C009 403 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 A0A0A6YYD4 124 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 TSPAN2O60636 221 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 LRP3O75074 770 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 CD5P06127 495 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 GLAP06280 429 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 GSTP1P09211 210 aaKnown RBP18.78■□□□□ 0.6
UPF3A-202ENST00000375299 PET100P0DJ07 73 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 IL11P20809 199 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 FPR2P25090 351 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms