RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CENPMQ9NSP4 180 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 GLTPQ9NZD2 209 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 FRRS1LQ9P0K9 344 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 KLHL9Q9P2J3 617 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 FBXL3Q9UKT7 428 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 CMAHPQ9Y471 501 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 LRP12Q9Y561 859 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 DSCAMO60469 2012 aa8.69□□□□□ -1.02
TPM3-210ENST00000368530 USF3Q68DE3 2245 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 IQCMA0A1B0GVH7 501 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 LINC01387J3KSC0 135 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 DNPH1O43598 174 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 GPRIN2O60269 458 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 SC5DO75845 299 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 CD1AP06126 327 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 SOX2P48431 317 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 OR10A3P58181 314 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 MFGE8Q08431 387 aaPredicted RBP8.68□□□□□ -1.02
TPM3-210ENST00000368530 MRPL28Q13084 256 aaKnown RBP8.68□□□□□ -1.02
TPM3-210ENST00000368530 TNK1Q13470 666 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 SGCAQ16586 387 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 HIST3H3Q16695 136 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 BEX5Q5H9J7 111 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 WDR38Q5JTN6 314 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 IDNKQ5T6J7 187 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 FCRLAQ7L513 359 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 CHMP1BQ7LBR1 199 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.68□□□□□ -1.02
TPM3-210ENST00000368530 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 NR2C2APQ86WQ0 139 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 RDH10Q8IZV5 341 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 ZNF611Q8N823 705 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 ST7LQ8TDW4 575 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 RNF128Q8TEB7 428 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 ABHD3Q8WU67 409 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 TMEM54Q969K7 222 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 PPP1R14AQ96A00 147 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 C4orf45Q96LM5 186 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 ABCB9Q9NP78 766 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 NOX4Q9NPH5 578 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 TIGARQ9NQ88 270 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 COMMD3Q9UBI1 195 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 PROCRQ9UNN8 238 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 SLC22A13Q9Y226 551 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 RTTNQ86VV8 2226 aa8.68□□□□□ -1.02
TPM3-210ENST00000368530 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
TPM3-210ENST00000368530 OR4C45A6NMZ5 311 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ZNF879B4DU55 563 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 OVOL3O00110 214 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 TMCC2O75069 709 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 PNPP00491 289 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 H2BFMP0C1H6 154 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 TNFSF8P32971 234 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ROM1Q03395 351 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 RASGEF1BQ0VAM2 473 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 HSD17B12Q53GQ0 312 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 TEX30Q5JUR7 227 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 SPANXN2Q5MJ10 180 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ABLIM2Q6H8Q1 611 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ZNF704Q6ZNC4 412 aaPredicted RBP8.67□□□□□ -1.02
TPM3-210ENST00000368530 AAED1Q7RTV5 226 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 CROCCP3Q8IVE0 287 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 TMEM123Q8N131 208 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 PARP16Q8N5Y8 322 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 OR2AJ1Q8NGZ0 328 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 OR10AC1Q8NH08 325 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 AP3S1Q92572 193 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 CPNE4Q96A23 557 aaPredicted RBP8.67□□□□□ -1.02
TPM3-210ENST00000368530 SLAMF6Q96DU3 332 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ATF6BQ99941 703 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 SF3B5Q9BWJ5 86 aaKnown RBP8.67□□□□□ -1.02
TPM3-210ENST00000368530 COMMD4Q9H0A8 199 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 MIXL1Q9H2W2 232 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 B3GAT2Q9NPZ5 323 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 POLE4Q9NR33 117 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 GDF2Q9UK05 429 aaPredicted RBP8.67□□□□□ -1.02
TPM3-210ENST00000368530 UGT2A1Q9Y4X1 527 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 FLVCR1Q9Y5Y0 555 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 LHFPL6Q9Y693 200 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 PRR14LQ5THK1 2151 aa8.67□□□□□ -1.02
TPM3-210ENST00000368530 ANKRD61A6NGH8 418 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 ZNF716A6NP11 495 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 HS3ST1O14792 307 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 PIN1P1O15428 100 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 HPGDSO60760 199 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 SS18L1O75177 396 aaPredicted RBP8.66□□□□□ -1.02
TPM3-210ENST00000368530 SLC43A1O75387 559 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 GATBO75879 557 aaKnown RBP8.66□□□□□ -1.02
TPM3-210ENST00000368530 ARL6IP5O75915 188 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 ZNF432O94892 652 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 SYNGR4O95473 234 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 UCHL1P09936 223 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 SLC2A2P11168 524 aaPredicted RBP8.66□□□□□ -1.02
TPM3-210ENST00000368530 PPP3CBP16298 524 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 RAB3BP20337 219 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 CD40LGP29965 261 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 NTF4P34130 210 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 TAF13Q15543 124 aa8.66□□□□□ -1.02
TPM3-210ENST00000368530 PCK2Q16822 640 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms