RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SERPINB7O75635 380 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 LHBP01229 141 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 CA6P23280 308 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 LCN6P62502 163 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-202ENST00000367740 CNN3Q15417 329 aaKnown RBP11.81□□□□□ -0.52
VAMP4-202ENST00000367740 ALG10Q5BKT4 473 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 SLC2A7Q6PXP3 512 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 MSRB3Q8IXL7 192 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-202ENST00000367740 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 LIPHQ8WWY8 451 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 SGTBQ96EQ0 304 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
VAMP4-202ENST00000367740 TSSC4Q9Y5U2 329 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-202ENST00000367740 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
VAMP4-202ENST00000367740 M0R1W7 72 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 RER1O15258 196 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 SYNGR1O43759 233 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 CLIC3O95833 236 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 SELLP14151 372 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 IKZF1Q13422 519 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 PCK2Q16822 640 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 LCE2AQ5TA79 106 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 GOLGA6L1Q8N7Z2 621 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 PLPP7Q8NBV4 271 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 TMEM255BQ8WV15 326 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 ACOT11Q8WXI4 607 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 PRSS22Q9GZN4 317 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 TMEM38AQ9H6F2 299 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 WDR55Q9H6Y2 383 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 PNPOQ9NVS9 261 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 TCF19Q9Y242 345 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 HIF3AQ9Y2N7 669 aa11.8□□□□□ -0.52
VAMP4-202ENST00000367740 SF3B6Q9Y3B4 125 aaKnown RBP11.8□□□□□ -0.52
VAMP4-202ENST00000367740 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 hCG_1807616A0A1W2PRN6 198 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 TCRBV4S1A1TA0A5B7 111 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 ACOT8O14734 319 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 IGF2P01344 180 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 IFNW1P05000 195 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 IDO1P14902 403 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 DGCR2P98153 550 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 ARSJQ5FYB0 599 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-202ENST00000367740 ZFAND6Q6FIF0 208 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 ADAMTSL5Q6ZMM2 481 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 TMEM219Q86XT9 240 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 NKAIN4Q8IVV8 208 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 MRPL41Q8IXM3 137 aaKnown RBP11.79□□□□□ -0.52
VAMP4-202ENST00000367740 IFT20Q8IY31 132 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
VAMP4-202ENST00000367740 TFAP2CQ92754 450 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 IKZF5Q9H5V7 419 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 GRPEL1Q9HAV7 217 aa11.79□□□□□ -0.52
VAMP4-202ENST00000367740 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 A6NLC8 198 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-202ENST00000367740 NDUFB3O43676 98 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 AMY2BP19961 511 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 SLC1A6P48664 564 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 POLR2JP52435 117 aaKnown RBP11.78□□□□□ -0.52
VAMP4-202ENST00000367740 ECH1Q13011 328 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 SLC36A1Q7Z2H8 476 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 LRRC75AQ8NAA5 344 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 SPRYD4Q8WW59 207 aaPredicted RBP11.78□□□□□ -0.52
VAMP4-202ENST00000367740 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 AURKCQ9UQB9 309 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 NDUFAF1Q9Y375 327 aa11.78□□□□□ -0.52
VAMP4-202ENST00000367740 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.52
VAMP4-202ENST00000367740 LOC100996750A0A140TA64 210 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 A6NDX4 124 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 A6NIZ1 184 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 VGLL3A8MV65 326 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 POLR3GO15318 223 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 TYROBPO43914 113 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 GMDSO60547 372 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 GRPP07492 148 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 CTLA4P16410 223 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 CD247P20963 164 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 TGM4P49221 684 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 RAB13P51153 203 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 CTXN1P60606 82 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 RAP1BP61224 184 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 RAP1AP62834 184 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 BLCAPP62952 87 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 MICBQ29980 383 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
VAMP4-202ENST00000367740 LRIF1Q5T3J3 769 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
VAMP4-202ENST00000367740 COQ7Q99807 217 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms