RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 A0A1W2PPE2 198 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 SLC9A3R2Q15599 337 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 ZNF124Q15973 351 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.66■□□□□ 0.26
SCARF1-202ENST00000348987 ZNF550Q7Z398 422 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 AQP3Q92482 292 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 SLAMF9Q96A28 289 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 AQP10Q96PS8 301 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 INTS14Q96SY0 518 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 CDC6Q99741 560 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 RAB33BQ9H082 229 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 GRHPRQ9UBQ7 328 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 SLCO1B1Q9Y6L6 691 aa16.66■□□□□ 0.26
SCARF1-202ENST00000348987 PMP2P02689 132 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 IFNA6P05013 189 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 SULT1A2P50226 295 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 RAB38P57729 211 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 MESTQ5EB52 335 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 DMRTC2Q8IXT2 367 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-202ENST00000348987 METTL27Q8N6F8 245 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-202ENST00000348987 OR10H5Q8NGA6 315 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 AKR7LQ8NHP1 331 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 MARS2Q96GW9 593 aaKnown RBP16.65■□□□□ 0.26
SCARF1-202ENST00000348987 SLC25A44Q96H78 314 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-202ENST00000348987 C14orf144Q96I85 54 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 PDE7BQ9NP56 450 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 IGKV1D-42A0A075B6H8 117 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 IFITM10A6NMD0 228 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 LDLRAD4O15165 306 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 CT45A8P0DMV1 189 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 CT45A9P0DMV2 189 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 SQSTM1Q13501 440 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 RAB32Q13637 225 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 ZNF260Q3ZCT1 412 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 CT45A2Q5DJT8 189 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 PMM1Q92871 262 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-202ENST00000348987 SPACA1Q9HBV2 294 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 SLC2A4RGQ9NR83 387 aa16.65■□□□□ 0.26
SCARF1-202ENST00000348987 WDR87Q6ZQQ6 2873 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 TNFRSF10CO14798 259 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 PLGP00747 810 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 CSTBP04080 98 aaKnown RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 EIF5AL1Q6IS14 154 aaKnown RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 SSX9Q7RTT3 188 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 FOXRED2Q8IWF2 684 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF524Q96C55 264 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 KLHDC3Q9BQ90 382 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 LMF2Q9BU23 707 aaKnown RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 PARP11Q9NR21 331 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 POLE3Q9NRF9 147 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM14AQ9Y6G1 99 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 PIAS3Q9Y6X2 628 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ARID1AO14497 2285 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 IFNA2P01563 188 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 HLA-DQA2P01906 255 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 CD63P08962 238 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 RAB6AP20340 208 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ITGA3P26006 1051 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 SULT1A1P50225 295 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 MFGE8Q08431 387 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 SLC17A1Q14916 467 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ZNHIT3Q15649 155 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 GKN2Q86XP6 184 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 LRRC75AQ8NAA5 344 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 OR4D6Q8NGJ1 314 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 OTOSQ8NHW6 89 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 ZDHHC12Q96GR4 267 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 OR10C1Q96KK4 312 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-202ENST00000348987 AMDHD2Q9Y303 409 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 CLDN16Q9Y5I7 305 aa16.64■□□□□ 0.25
SCARF1-202ENST00000348987 RAB27BO00194 218 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 CSTAP01040 98 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 MPZP25189 248 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 HMGN3Q15651 99 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 RTN4RL2Q86UN3 420 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 THRSPQ92748 146 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 FAM46BQ96A09 425 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 DNAJA3Q96EY1 480 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 TSPAN32Q96QS1 320 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 OPA3Q9H6K4 179 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 B9D1Q9UPM9 204 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 HIF3AQ9Y2N7 669 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 PI3P19957 117 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 S100A10P60903 97 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 PHF19Q5T6S3 580 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 ARRDC1Q8N5I2 433 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 C16orf52Q8NHV5 167 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 GPBAR1Q8TDU6 330 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 OR8B4Q96RC9 309 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 GSKIPQ9P0R6 139 aa16.63■□□□□ 0.25
SCARF1-202ENST00000348987 GDF2Q9UK05 429 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-202ENST00000348987 LYL1P12980 280 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF74Q16587 644 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 MDGA2Q7Z553 956 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 TAF8Q7Z7C8 310 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF615Q8N8J6 731 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms