RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZFP3Q96NJ6 502 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 CACNA1GO43497 2377 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 LMX1BO60663 402 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 MTRF1O75570 445 aaKnown RBP16.28■□□□□ 0.2
PTN-201ENST00000348225 UPK1BO75841 260 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 LCATP04180 440 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 RAB1AP62820 205 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 PLP2Q04941 152 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 XKRXQ6PP77 449 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 PLPP7Q8NBV4 271 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 LGALS14Q8TCE9 139 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 LIN7BQ9HAP6 207 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 STEAP1Q9UHE8 339 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 ZNF391Q9UJN7 358 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 PROCRQ9UNN8 238 aa16.28■□□□□ 0.2
PTN-201ENST00000348225 GTF3C1Q12789 2109 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 DHRS3O75911 302 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 APOA1P02647 267 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 TMIGD3P0DMS9 266 aaPredicted RBP16.27■□□□□ 0.2
PTN-201ENST00000348225 ELK1P19419 428 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 DDOSTP39656 456 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 SCAND1P57086 179 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 TBRG1Q3YBR2 411 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 RTL6Q6ICC9 239 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 PGAP1Q75T13 922 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 CCDC36Q8IYA8 594 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 OR14K1Q8NGZ2 314 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 ADAT3Q96EY9 351 aaPredicted RBP16.27■□□□□ 0.2
PTN-201ENST00000348225 SPENQ96T58 3664 aaKnown RBP16.27■□□□□ 0.2
PTN-201ENST00000348225 PLSCR4Q9NRQ2 329 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 CYSLTR2Q9NS75 346 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 EXTL2Q9UBQ6 330 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 ETV7Q9Y603 341 aa16.27■□□□□ 0.2
PTN-201ENST00000348225 PRRC2CQ9Y520 2896 aaKnown RBP16.27■□□□□ 0.2
PTN-201ENST00000348225 E9PLN8 166 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 PRRG2O14669 202 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 IL2RAP01589 272 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 ERCC1P07992 297 aaPredicted RBP16.27■□□□□ 0.19
PTN-201ENST00000348225 RAB3AP20336 220 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 IGHV1-2P23083 117 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 BDKRB2P30411 391 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 TIMP3P35625 211 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 FOXF2Q12947 444 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 ZNF79Q15937 498 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 GSG1Q2KHT4 349 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 SNAI3Q3KNW1 292 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 HIKESHIQ53FT3 197 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 UBE2NLQ5JXB2 153 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 Q6ZSR3 168 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 SEM1Q6ZVN7 128 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 CPEB3Q8NE35 698 aaKnown RBP16.27■□□□□ 0.19
PTN-201ENST00000348225 OR1M1Q8NGA1 313 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 OR5H6Q8NGV6 325 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 FOXRED1Q96CU9 486 aaPredicted RBP16.27■□□□□ 0.19
PTN-201ENST00000348225 C10orf35Q96D05 121 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 SLX1AQ9BQ83 275 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 SRRQ9GZT4 340 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 RGCCQ9H4X1 137 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 ABCB10Q9NRK6 738 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 FAM215AQ9Y5M1 114 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 V9GYS6 101 aa16.27■□□□□ 0.19
PTN-201ENST00000348225 A0A0B4J203 849 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 LOC390937A0A1W2PQ73 354 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 CIB4A0PJX0 185 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 SLC17A2O00624 439 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 TNFSF13O75888 250 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 EIF4EP06730 217 aaKnown RBP16.26■□□□□ 0.19
PTN-201ENST00000348225 ANOS1P23352 680 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 UBE2NP61088 152 aaKnown RBP16.26■□□□□ 0.19
PTN-201ENST00000348225 HGFACQ04756 655 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 SPOCK1Q08629 439 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 IL18Q14116 193 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 RAB11BQ15907 218 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 RGS21Q2M5E4 152 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 GDPD1Q8N9F7 314 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 C1orf162Q8NEQ5 155 aaPredicted RBP16.26■□□□□ 0.19
PTN-201ENST00000348225 LYZL4Q96KX0 146 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 TP63Q9H3D4 680 aaPredicted RBP16.26■□□□□ 0.19
PTN-201ENST00000348225 TMEM138Q9NPI0 162 aa16.26■□□□□ 0.19
PTN-201ENST00000348225 IGF2RP11717 2491 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 C5orf63A6NC05 138 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 ZNF503-AS2A6NEH8 195 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 DHRS7CA6NNS2 312 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 HOXB1P14653 301 aaPredicted RBP16.25■□□□□ 0.19
PTN-201ENST00000348225 COX5AP20674 150 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 STOMP27105 288 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 THBS4P35443 961 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 PYDC2Q56P42 97 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 GFRALQ6UXV0 394 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 OR51A2Q8NGJ7 313 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 OR6M1Q8NGM8 313 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 SGK3Q96BR1 496 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 SNRNP40Q96DI7 357 aaKnown RBP16.25■□□□□ 0.19
PTN-201ENST00000348225 REEP6Q96HR9 211 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 SOSTQ9BQB4 213 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 SOX7Q9BT81 388 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 C1QTNF5Q9BXJ0 243 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 NOX3Q9HBY0 568 aa16.25■□□□□ 0.19
PTN-201ENST00000348225 ISPDA4D126 451 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms