RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SGK3Q96BR1 496 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 WACQ9BTA9 647 aa13.22□□□□□ -0.29
PRPF3-201ENST00000324862 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
PRPF3-201ENST00000324862 A0A1B0GTI1 187 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 TMEM212A6NML5 194 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 PIN1P1O15428 100 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 CALCRP30988 508 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 HLXQ14774 488 aaPredicted RBP13.21□□□□□ -0.29
PRPF3-201ENST00000324862 GLYATL3Q5SZD4 288 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 CEACAM19Q7Z692 300 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 ASB5Q8WWX0 329 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 MUCL1Q96DR8 90 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
PRPF3-201ENST00000324862 SC5DO75845 299 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 IGLV1-44P01699 117 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 OCM2P0CE71 109 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.3
PRPF3-201ENST00000324862 CD200R1LQ6Q8B3 271 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 MED18Q9BUE0 208 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 COMMD4Q9H0A8 199 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 STARD10Q9Y365 291 aa13.21□□□□□ -0.3
PRPF3-201ENST00000324862 COX5BP10606 129 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 ZNF92Q03936 586 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 ASPHD2Q6ICH7 369 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 DPPA2Q7Z7J5 298 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 C1QTNF5Q9BXJ0 243 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 SPTAN1Q13813 2472 aaKnown RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 A0A1W2PPW3 197 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 RGS9O75916 674 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 PCSK6P29122 969 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 TMBIM6P55061 237 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 MXD1Q05195 221 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 YIF1BQ5BJH7 314 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 ZMAT1Q5H9K5 638 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 EGFL6Q8IUX8 553 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 RNASE6Q93091 150 aaKnown RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 TMEM106AQ96A25 262 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 DGCR14Q96DF8 476 aaKnown RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 KCNS3Q9BQ31 491 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 PPP1R3EQ9H7J1 279 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 NOX4Q9NPH5 578 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-201ENST00000324862 SSR3Q9UNL2 185 aa13.2□□□□□ -0.3
PRPF3-201ENST00000324862 TRDV1A0A1B0GX56 115 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 SYT7O43581 403 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CLEC2LP0C7M8 214 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
PRPF3-201ENST00000324862 TNK1Q13470 666 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 COLCA1Q6ZS62 124 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 REEP6Q96HR9 211 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 OBP2BQ9NPH6 170 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CRNNQ9UBG3 495 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-201ENST00000324862 IGHV2OR16-5A0A0B4J2B6 119 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 GPRIN2O60269 458 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 ZNF35P13682 527 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CAV3P56539 151 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 MS4A15Q8N5U1 240 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 MOB1AQ9H8S9 216 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CDH20Q9HBT6 801 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 PTTG3PQ9NZH4 202 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 CRIM1Q9NZV1 1036 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
PRPF3-201ENST00000324862 DCHS2Q6V1P9 2916 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ZNF879B4DU55 563 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ISG15P05161 165 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ACKR3P25106 362 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 NAAAQ02083 359 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF3-201ENST00000324862 Q499Y3 187 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ZNF704Q6ZNC4 412 aaPredicted RBP13.18□□□□□ -0.3
PRPF3-201ENST00000324862 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 GPR148Q8TDV2 347 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ADAT3Q96EY9 351 aaPredicted RBP13.18□□□□□ -0.3
PRPF3-201ENST00000324862 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 FZR1Q9UM11 496 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 LRBAP50851 2863 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 ANKHD1Q8IWZ3 2542 aaKnown RBP13.18□□□□□ -0.3
PRPF3-201ENST00000324862 TRAV8-7A0A075B6U6 113 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 SMPD2O60906 423 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 NCR1O76036 304 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 CLDN14O95500 239 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 IGLV3-1P01715 115 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 CD1AP06126 327 aa13.18□□□□□ -0.3
PRPF3-201ENST00000324862 UBCP0CG48 685 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms