RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IGHV5-51A0A0C4DH38 117 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 A0A0U1RQK1 487 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 LOC107986453A0A1B0GWG9 222 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 H7C1Q1 480 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 HMGB3O15347 200 aaKnown RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 GNB3P16520 340 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 UBE2KP61086 200 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 GLIPR1L1Q6UWM5 242 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 C16orf52Q8NHV5 167 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 GHITMQ9H3K2 345 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 TAF9BQ9HBM6 251 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 SPACA1Q9HBV2 294 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 PRELID3BQ9Y3B1 194 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 ABCA4P78363 2273 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 TRAV36DV7A0A075B6V5 113 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 SHISA3A0PJX4 238 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 ZNF814B7Z6K7 855 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 ITGB2P05107 769 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 TMIGD3P0DMS9 266 aaPredicted RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 FOLR1P15328 257 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 MRM1Q6IN84 353 aaKnown RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 DCTN6O00399 190 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 OR7C1O76099 320 aaPredicted RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 ATP1B3P54709 279 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 RPS18P62269 152 aaKnown RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
HPS3-201ENST00000296051 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 FBXW12Q6X9E4 464 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 SLC16A13Q7RTY0 426 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
HPS3-201ENST00000296051 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 ZNF85Q03923 595 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 ACKR1Q16570 336 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 C1orf140Q5VVS0 124 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 NICN1Q9BSH3 213 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 C1orf198Q9H425 327 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 FOXJ3Q9UPW0 622 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 GFRA3O60609 400 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 GABRA1P14867 456 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 ASB17Q8WXJ9 295 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 WNT2BQ93097 391 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 SIGLEC11Q96RL6 698 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 PCYT1BQ9Y5K3 369 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 KCNAB3O43448 404 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 XRCC3O43542 346 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 EIF2S3P41091 472 aaKnown RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 Q6ZRG5 221 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 GRINAQ7Z429 371 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 EXOGQ9Y2C4 368 aaKnown RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
HPS3-201ENST00000296051 EPOPA6NHQ4 379 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 TRAPPC2LH3BP13 241 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 DLL1O00548 723 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 CCL4P13236 92 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 IGSF11Q5DX21 431 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 ZNF709Q8N972 641 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 FRZBQ92765 325 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 PIGTQ969N2 578 aa12.11□□□□□ -0.47
HPS3-201ENST00000296051 TMEM200CA6NKL6 621 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 SEMG1P04279 462 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 RFLNBQ8N5W9 214 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 FAM71CQ8NEG0 241 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 OR1M1Q8NGA1 313 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
HPS3-201ENST00000296051 GABRG3Q99928 467 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 IER2Q9BTL4 223 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CHRNA9Q9UGM1 479 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 ADRA2AP08913 450 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 NQO2P16083 231 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 PPICP45877 212 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 DHRS2Q13268 280 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms