RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TRAV18A0A075B6X5 111 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ELOA3CA0A087WX78 387 aaPredicted RBP17.77■□□□□ 0.44
HOXC13-201ENST00000243056 TRBV6-7A0A0A0MS04 114 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 AMY2AP04746 511 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ACTC1P68032 377 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ACTA1P68133 377 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 PPP1R1AQ13522 171 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ARMC6Q6NXE6 501 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 RPL22L1Q6P5R6 122 aaKnown RBP17.77■□□□□ 0.44
HOXC13-201ENST00000243056 STAC2Q6ZMT1 411 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 Q6ZRG5 221 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 GDF7Q7Z4P5 450 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 BHLHE23Q8NDY6 225 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ARHGDIGQ99819 225 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 ASPMQ8IZT6 3477 aa17.77■□□□□ 0.44
HOXC13-201ENST00000243056 A0A1W2PS29 197 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 UMAD1C9J7I0 102 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 WNT11O96014 354 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 RAB6AP20340 208 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 MSX1P28360 303 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 RAC1P63000 192 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 HIST2H3PS2Q5TEC6 136 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 OGFOD3Q6PK18 319 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 THSD4Q6ZMP0 1018 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 C17orf82Q86X59 251 aaPredicted RBP17.77■□□□□ 0.43
HOXC13-201ENST00000243056 ZG16BQ96DA0 208 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 SLC25A21Q9BQT8 299 aaPredicted RBP17.77■□□□□ 0.43
HOXC13-201ENST00000243056 NEUROD4Q9HD90 331 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 ASCL3Q9NQ33 180 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 CMC2Q9NRP2 79 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 VSIG4Q9Y279 399 aa17.77■□□□□ 0.43
HOXC13-201ENST00000243056 A0A087WUJ7 227 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 IGHV5-51A0A0C4DH38 117 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 H0YGG7 62 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 CTAG2O75638 210 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 PTBP3O95758 552 aaKnown RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 F13BP05160 661 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 CXCL1P09341 107 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 SSR2P43308 183 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 PPICP45877 212 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 TDGF1P3P51864 188 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 ARF3P61204 181 aaPredicted RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 CRMP1Q14194 572 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 TMPRSS12Q86WS5 348 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 OR13C8Q8NGS7 320 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 MUCL1Q96DR8 90 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 SCRT1Q9BWW7 348 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 ARRDC1-AS1Q9H2J1 176 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 KCNK15Q9H427 330 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 PARP11Q9NR21 331 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 CHRNA9Q9UGM1 479 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 PILRAQ9UKJ1 303 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 SEC16AO15027 2179 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 UNC119BA6NIH7 251 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 C9J4A7 227 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 ZNF888P0CJ79 500 aaPredicted RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 CSRP1P21291 193 aaKnown RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 EPHA8P29322 1005 aaPredicted RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 DEFB134Q4QY38 66 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 KCTD9Q7L273 389 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 LYG2Q86SG7 212 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 MFSD9Q8NBP5 474 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 BAHD1Q8TBE0 780 aaPredicted RBP17.76■□□□□ 0.43
HOXC13-201ENST00000243056 MRI1Q9BV20 369 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 POTEKPQ9BYX7 375 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 BCL2L10Q9HD36 194 aa17.76■□□□□ 0.43
HOXC13-201ENST00000243056 TNRC6BQ9UPQ9 1833 aaKnown RBP17.75■□□□□ 0.43
HOXC13-201ENST00000243056 A0A0J9YY10 115 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 TVP23AA6NH52 213 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 CLEC3AO75596 197 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 CRYABP02511 175 aaKnown RBP17.75■□□□□ 0.43
HOXC13-201ENST00000243056 ZNF735P0CB33 412 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 FGF7P21781 194 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 CAPZBP47756 277 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SULT1A2P50226 295 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 BTN3A2P78410 334 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 CLN3Q13286 438 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 ZNHIT3Q15649 155 aaPredicted RBP17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SAPCD1Q5SSQ6 148 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 OR4C11Q6IEV9 310 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 NAXEQ8NCW5 288 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 OR52L1Q8NGH7 329 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SUN3Q8TAQ9 357 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SAP25Q8TEE9 199 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SLC41A3Q96GZ6 507 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 CST11Q9H112 138 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 SYT4Q9H2B2 425 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 HS3ST3B1Q9Y662 390 aa17.75■□□□□ 0.43
HOXC13-201ENST00000243056 A6NNC1 897 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 PRSS3P35030 304 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 NKX6-1P78426 367 aaPredicted RBP17.74■□□□□ 0.43
HOXC13-201ENST00000243056 ISXQ2M1V0 245 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 ZNF343Q6P1L6 599 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 ZNF529Q6P280 563 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 GUSBP11Q6P575 273 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 FOXRED2Q8IWF2 684 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 CD300LFQ8TDQ1 290 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 PHYHIPQ92561 330 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 SLC25A36Q96CQ1 311 aa17.74■□□□□ 0.43
HOXC13-201ENST00000243056 ZMYND19Q96E35 227 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms