RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 PALMDQ9NP74 551 aa8.8□□□□□ -1
UPF1-213ENST00000601981 SNTG1Q9NSN8 517 aa8.8□□□□□ -1
UPF1-213ENST00000601981 TMEM38BQ9NVV0 291 aa8.8□□□□□ -1
UPF1-213ENST00000601981 CRNNQ9UBG3 495 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 IKZF2Q9UKS7 526 aa8.8□□□□□ -1
UPF1-213ENST00000601981 PEX16Q9Y5Y5 336 aa8.8□□□□□ -1
UPF1-213ENST00000601981 PRR14LQ5THK1 2151 aa8.79□□□□□ -1
UPF1-213ENST00000601981 A0A096LPE4 126 aa8.79□□□□□ -1
UPF1-213ENST00000601981 A0A1W2PPZ6 126 aa8.79□□□□□ -1
UPF1-213ENST00000601981 TMCC2O75069 709 aa8.79□□□□□ -1
UPF1-213ENST00000601981 GATBO75879 557 aaKnown RBP8.79□□□□□ -1
UPF1-213ENST00000601981 MSR1P21757 451 aa8.79□□□□□ -1
UPF1-213ENST00000601981 CRYGSP22914 178 aa8.79□□□□□ -1
UPF1-213ENST00000601981 CFL1P23528 166 aaKnown RBP8.79□□□□□ -1
UPF1-213ENST00000601981 LAP3P28838 519 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SSTR2P30874 369 aa8.79□□□□□ -1
UPF1-213ENST00000601981 S100A5P33763 92 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SDC2P34741 201 aa8.79□□□□□ -1
UPF1-213ENST00000601981 PSMB10P40306 273 aa8.79□□□□□ -1
UPF1-213ENST00000601981 FOXG1P55316 489 aaPredicted RBP8.79□□□□□ -1
UPF1-213ENST00000601981 PCBD1P61457 104 aa8.79□□□□□ -1
UPF1-213ENST00000601981 HNRNPA0Q13151 305 aaKnown RBP8.79□□□□□ -1
UPF1-213ENST00000601981 ALKBH1Q13686 389 aaKnown RBP8.79□□□□□ -1
UPF1-213ENST00000601981 EIF2B1Q14232 305 aaKnown RBP8.79□□□□□ -1
UPF1-213ENST00000601981 KCNMB1Q16558 191 aa8.79□□□□□ -1
UPF1-213ENST00000601981 MEP1BQ16820 701 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SLC36A2Q495M3 483 aa8.79□□□□□ -1
UPF1-213ENST00000601981 HIKESHIQ53FT3 197 aa8.79□□□□□ -1
UPF1-213ENST00000601981 YIF1BQ5BJH7 314 aa8.79□□□□□ -1
UPF1-213ENST00000601981 ZNF544Q6NX49 715 aa8.79□□□□□ -1
UPF1-213ENST00000601981 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
UPF1-213ENST00000601981 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
UPF1-213ENST00000601981 FOXL2NBQ6ZUU3 175 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SLC16A14Q7RTX9 510 aa8.79□□□□□ -1
UPF1-213ENST00000601981 CROCCP3Q8IVE0 287 aa8.79□□□□□ -1
UPF1-213ENST00000601981 OR10H5Q8NGA6 315 aa8.79□□□□□ -1
UPF1-213ENST00000601981 C11orf40Q8WZ69 217 aa8.79□□□□□ -1
UPF1-213ENST00000601981 AP3S1Q92572 193 aa8.79□□□□□ -1
UPF1-213ENST00000601981 MARVELD3Q96A59 401 aa8.79□□□□□ -1
UPF1-213ENST00000601981 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
UPF1-213ENST00000601981 FOXN4Q96NZ1 517 aa8.79□□□□□ -1
UPF1-213ENST00000601981 AMELYQ99218 206 aa8.79□□□□□ -1
UPF1-213ENST00000601981 KCNS3Q9BQ31 491 aa8.79□□□□□ -1
UPF1-213ENST00000601981 WACQ9BTA9 647 aa8.79□□□□□ -1
UPF1-213ENST00000601981 ABHD6Q9BV23 337 aa8.79□□□□□ -1
UPF1-213ENST00000601981 BARHL1Q9BZE3 327 aa8.79□□□□□ -1
UPF1-213ENST00000601981 C6orf62Q9GZU0 229 aaPredicted RBP8.79□□□□□ -1
UPF1-213ENST00000601981 RNF121Q9H920 327 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SMURF1Q9HCE7 757 aa8.79□□□□□ -1
UPF1-213ENST00000601981 SLCO1C1Q9NYB5 712 aa8.79□□□□□ -1
UPF1-213ENST00000601981 POLR1DQ9Y2S0 133 aa8.79□□□□□ -1
UPF1-213ENST00000601981 ZNF281Q9Y2X9 895 aa8.79□□□□□ -1
UPF1-213ENST00000601981 TRAV1-2A0A0B4J238 106 aa8.78□□□□□ -1
UPF1-213ENST00000601981 A6NNC1 897 aa8.78□□□□□ -1
UPF1-213ENST00000601981 PSMD9O00233 223 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ZNF254O75437 659 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ARL6IP5O75915 188 aa8.78□□□□□ -1
UPF1-213ENST00000601981 MPZL1O95297 269 aa8.78□□□□□ -1
UPF1-213ENST00000601981 UCHL1P09936 223 aa8.78□□□□□ -1
UPF1-213ENST00000601981 CLEC2LP0C7M8 214 aa8.78□□□□□ -1
UPF1-213ENST00000601981 CD79AP11912 226 aa8.78□□□□□ -1
UPF1-213ENST00000601981 BMP4P12644 408 aa8.78□□□□□ -1
UPF1-213ENST00000601981 MYL9P24844 172 aa8.78□□□□□ -1
UPF1-213ENST00000601981 COL8A1P27658 744 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ARR3P36575 388 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ETV6P41212 452 aa8.78□□□□□ -1
UPF1-213ENST00000601981 RPS27P42677 84 aaKnown RBP8.78□□□□□ -1
UPF1-213ENST00000601981 CCR9P51686 369 aa8.78□□□□□ -1
UPF1-213ENST00000601981 RIDAP52758 137 aaKnown RBP8.78□□□□□ -1
UPF1-213ENST00000601981 NANOS3P60323 173 aaKnown RBP8.78□□□□□ -1
UPF1-213ENST00000601981 RPS11P62280 158 aaKnown RBP eCLIP8.78□□□□□ -1
UPF1-213ENST00000601981 PLP2Q04941 152 aa8.78□□□□□ -1
UPF1-213ENST00000601981 MXD1Q05195 221 aa8.78□□□□□ -1
UPF1-213ENST00000601981 INSL4Q14641 139 aa8.78□□□□□ -1
UPF1-213ENST00000601981 DAZAP2Q15038 168 aaPredicted RBP8.78□□□□□ -1
UPF1-213ENST00000601981 SGCAQ16586 387 aa8.78□□□□□ -1
UPF1-213ENST00000601981 GSG1Q2KHT4 349 aa8.78□□□□□ -1
UPF1-213ENST00000601981 C3orf36Q3SXR2 165 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ACSM3Q53FZ2 586 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ZMAT1Q5H9K5 638 aa8.78□□□□□ -1
UPF1-213ENST00000601981 DEGS2Q6QHC5 323 aa8.78□□□□□ -1
UPF1-213ENST00000601981 UNQ9370/PRO34162Q6UXP9 181 aa8.78□□□□□ -1
UPF1-213ENST00000601981 CEACAM19Q7Z692 300 aa8.78□□□□□ -1
UPF1-213ENST00000601981 KRT77Q7Z794 578 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.78□□□□□ -1
UPF1-213ENST00000601981 TPRA1Q86W33 373 aa8.78□□□□□ -1
UPF1-213ENST00000601981 OR2G2Q8NGZ5 317 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ST7LQ8TDW4 575 aa8.78□□□□□ -1
UPF1-213ENST00000601981 THRSPQ92748 146 aa8.78□□□□□ -1
UPF1-213ENST00000601981 C14orf79Q96F83 325 aa8.78□□□□□ -1
UPF1-213ENST00000601981 MAP6Q96JE9 813 aa8.78□□□□□ -1
UPF1-213ENST00000601981 C4orf45Q96LM5 186 aa8.78□□□□□ -1
UPF1-213ENST00000601981 MROQ9BYG7 248 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ELOVL3Q9HB03 270 aa8.78□□□□□ -1
UPF1-213ENST00000601981 SLC25A15Q9Y619 301 aa8.78□□□□□ -1
UPF1-213ENST00000601981 ABCA4P78363 2273 aa8.78□□□□□ -1
UPF1-213ENST00000601981 A0A1W2PR80 420 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 TMEM212A6NML5 194 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 OR4C45A6NMZ5 311 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms