RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 HPGDSO60760 199 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 FARS2O95363 451 aaKnown RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 NGFP01138 241 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 IL1AP01583 271 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 LCATP04180 440 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MAS1P04201 325 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 GABRA1P14867 456 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 FAHP16930 419 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ATF1P18846 271 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 COX5AP20674 150 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 BMP5P22003 454 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 CCNOP22674 350 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MYL9P24844 172 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ACKR3P25106 362 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 CTSSP25774 331 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MMP16P51512 607 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 IDH3GP51553 393 aaPredicted RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ERVS71-1P61550 626 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 RAB1AP62820 205 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 GRB2P62993 217 aaKnown RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SPOCK1Q08629 439 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MRPL28Q13084 256 aaKnown RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 TNK1Q13470 666 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SNTB1Q13884 538 aaKnown RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 P2RY14Q15391 338 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 CDSNQ15517 529 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 HSPB2Q16082 182 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ZNF404Q494X3 552 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SPATA46Q5T0L3 261 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 IDNKQ5T6J7 187 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 OR2A2Q6IF42 318 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SFXN4Q6P4A7 337 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 DEGS2Q6QHC5 323 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 METAP1DQ6UB28 335 aaPredicted RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 Q6ZT83 130 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 C22orf34Q6ZV56 151 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 RFPL4BQ6ZWI9 263 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 BHLHA15Q7RTS1 189 aaPredicted RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ABHD12BQ7Z5M8 362 aaPredicted RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MS4A15Q8N5U1 240 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 OR13C9Q8NGT0 318 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 OR14K1Q8NGZ2 314 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 NPRL2Q8WTW4 380 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 TMEM106AQ96A25 262 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SGK3Q96BR1 496 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ZNF75AQ96N20 296 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 DACH2Q96NX9 599 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 SPACA5Q96QH8 159 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 COQ7Q99807 217 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 MED18Q9BUE0 208 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 HDHD2Q9H0R4 259 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 KCNN2Q9H2S1 579 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 TP63Q9H3D4 680 aaPredicted RBP5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 NIPAL2Q9H841 368 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ABCB9Q9NP78 766 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 AKIP1Q9NQ31 210 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 PLSCR4Q9NRQ2 329 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 GLRX2Q9NS18 164 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 PTTG3PQ9NZH4 202 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 COMMD3Q9UBI1 195 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 DAPK2Q9UIK4 370 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 DHDHQ9UQ10 334 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 GSTK1Q9Y2Q3 226 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ZFHX4Q86UP3 3567 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 KIAA1549Q9HCM3 1950 aa5.34□□□□□ -1.55
RNU4ATAC-201ENST00000580972 ALPK2Q86TB3 2170 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 PTPRQQ9UMZ3 2332 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 TRAV1-2A0A0B4J238 106 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 IGKV1-9A0A0C4DH69 117 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 A0A1B0GVI7 797 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 OR6C65A6NJZ3 312 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 C3orf80F5H4A9 247 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 LILRA1O75019 489 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 GATBO75879 557 aaKnown RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 SERPINA3P01011 423 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 IL2RAP01589 272 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 IGLV3-1P01715 115 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 PRB1P04280 392 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 EIF4EP06730 217 aaKnown RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 UBCP0CG48 685 aaKnown RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 IGFBP3P17936 291 aaPredicted RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 SRMP19623 302 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 RAB3BP20337 219 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 CCL1P22362 96 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 GALP22466 123 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 AZGP1P25311 298 aaKnown RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 DCTDP32321 178 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 TIMP3P35625 211 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 RBMXP38159 391 aaKnown RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 UQCRFS1P47985 274 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 RORCP51449 518 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 TPTEP56180 551 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 PCBD1P61457 104 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 ZNF92Q03936 586 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 FAM27E3Q08E93 113 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 HLXQ14774 488 aaPredicted RBP5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 TRAM1Q15629 374 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 GSG1Q2KHT4 349 aa5.33□□□□□ -1.56
RNU4ATAC-201ENST00000580972 SLC36A2Q495M3 483 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms