RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	POMP	Q9Y244	141 aa		4.02	□□□□□ -1.77
ATXN3-238	ENST00000556288	POLR1D	Q9Y2S0	133 aa		4.02	□□□□□ -1.77
ATXN3-238	ENST00000556288	ARHGAP32	A7KAX9	2087 aa		4.02	□□□□□ -1.77
ATXN3-238	ENST00000556288	PDZD2	O15018	2839 aa		4.02	□□□□□ -1.77
ATXN3-238	ENST00000556288	MAP1A	P78559	2803 aa	Predicted RBP	4.02	□□□□□ -1.77
ATXN3-238	ENST00000556288	SLC22A23	A1A5C7	686 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	AQP12B	A6NM10	295 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SHISA9	B4DS77	424 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	RPL36A-HNRNPH2	H7BZ11	118 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PDLIM1	O00151	329 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	IMPA2	O14732	288 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ACOT8	O14734	319 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TPD52L2	O43399	206 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SSX4	O60224	188 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	FKBP6	O75344	327 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	KHDRBS3	O75525	346 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GOSR1	O95249	250 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	MPZL1	O95297	269 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	BAG2	O95816	211 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PTH	P01270	115 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SEMG1	P04279	462 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR4A8	P0C604	315 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CECR9	P0C854	216 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NR2C1	P13056	603 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF823	P16415	610 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF32	P17041	273 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CD53	P19397	219 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NPR2	P20594	1047 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	LAP3	P28838	519 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PYCR1	P32322	319 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TTK	P33981	857 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	THBS4	P35443	961 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SERPINF1	P36955	418 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CDKN2A	P42771	156 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GDI2	P50395	445 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	RPS4X	P62701	263 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NAAA	Q02083	359 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TSPAN31	Q12999	210 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SNTB2	Q13425	540 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	KRR1	Q13601	381 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TAF13	Q15543	124 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TBC1D28	Q2M2D7	210 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PABPC1L2A	Q5JQF8	200 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CEP78	Q5JTW2	689 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ARMC4	Q5T2S8	1044 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	FAM90A2P	Q658T7	463 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GPR139	Q6DWJ6	353 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PGBD2	Q6P3X8	592 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SLC25A47	Q6Q0C1	308 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	UGT2A3	Q6UWM9	527 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PAMR1	Q6UXH9	720 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NHLRC1	Q6VVB1	395 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF66	Q6ZN08	573 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TMEM179B	Q7Z7N9	219 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	AQP12A	Q8IXF9	295 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	MUC15	Q8N387	334 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF611	Q8N823	705 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CYB561A3	Q8NBI2	242 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SLC30A7	Q8NEW0	376 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR10G2	Q8NGC3	310 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR51L1	Q8NGJ5	315 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR1J2	Q8NGS2	313 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR2AJ1	Q8NGZ0	328 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	AKR7L	Q8NHP1	331 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TEX47	Q8TBZ9	253 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	LIPH	Q8WWY8	451 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	POP5	Q969H6	163 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	PLEKHA8	Q96JA3	519 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TSSK2	Q96PF2	358 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NMNAT3	Q96T66	252 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	FEV	Q99581	238 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GPA33	Q99795	319 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	DHRS9	Q9BPW9	319 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	ALG12	Q9BV10	488 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	QTRT1	Q9BXR0	403 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TEX12	Q9BXU0	123 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	WDR12	Q9GZL7	423 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NUAK2	Q9H093	628 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SYT4	Q9H2B2	425 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	CXorf56	Q9H5V9	222 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SIAE	Q9HAT2	523 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	OBP2B	Q9NPH6	170 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	RPRD1B	Q9NQG5	326 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	BEX4	Q9NWD9	120 aa	Predicted RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GAR1	Q9NY12	217 aa	Known RBP	4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	VNN3	Q9NY84	501 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	DNAJB9	Q9UBS3	223 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SLC7A8	Q9UHI5	535 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	SIGLEC7	Q9Y286	467 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	GRIP1	Q9Y3R0	1128 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	AP4S1	Q9Y587	144 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	TIMM10B	Q9Y5J6	103 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	LYVE1	Q9Y5Y7	322 aa		4.01	□□□□□ -1.77
ATXN3-238	ENST00000556288	NOTCH2	Q04721	2471 aa		4	□□□□□ -1.77
ATXN3-238	ENST00000556288	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4	□□□□□ -1.77
ATXN3-238	ENST00000556288	IGKV1D-43	A0A0B4J1Z2	117 aa		4	□□□□□ -1.77
ATXN3-238	ENST00000556288	IGHV2OR16-5	A0A0B4J2B6	119 aa		4	□□□□□ -1.77
ATXN3-238	ENST00000556288		A0A1W2PPW3	197 aa		4	□□□□□ -1.77

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