RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	ZNF285	Q96NJ3	590 aa		11.53	□□□□□ -0.56
DDX11-223	ENST00000542838	RNF126	Q9BV68	326 aa		11.53	□□□□□ -0.56
DDX11-223	ENST00000542838	NMES1	Q9C002	83 aa		11.53	□□□□□ -0.56
DDX11-223	ENST00000542838	TMEM100	Q9NV29	134 aa		11.53	□□□□□ -0.56
DDX11-223	ENST00000542838	WBP1L	Q9NX94	342 aa		11.53	□□□□□ -0.56
DDX11-223	ENST00000542838	BPNT1	O95861	308 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	CAPZB	P47756	277 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	PNLIPRP2	P54317	469 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	EBP	Q15125	230 aa	Known RBP	11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	DNM1P34	Q6PK57	102 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	TTLL10	Q6ZVT0	673 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	C9orf40	Q8IXQ3	194 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	OR1M1	Q8NGA1	313 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	OR4K15	Q8NH41	348 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	RRNAD1	Q96FB5	475 aa	Known RBP	11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	TGM7	Q96PF1	710 aa		11.52	□□□□□ -0.56
DDX11-223	ENST00000542838	GON4L	Q3T8J9	2241 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	REV3L	O60673	3130 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	SSX5	O60225	188 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	GABRG2	P18507	467 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	CX3CR1	P49238	355 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	RAB13	P51153	203 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	GFER	P55789	205 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	TAS2R31	P59538	309 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	DCAF7	P61962	342 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	QRFP	P83859	136 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	CYCS	P99999	105 aa	Known RBP	11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	NAAA	Q02083	359 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	C10orf91	Q5T1B1	145 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	AWAT2	Q6E213	333 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	GRINA	Q7Z429	371 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	OR4A4P	Q8NGN8	299 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	OR10R2	Q8NGX6	335 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	ROBO4	Q8WZ75	1007 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	ADAT3	Q96EY9	351 aa	Predicted RBP	11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	CYTL1	Q9NRR1	136 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	MMACHC	Q9Y4U1	282 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	TRANK1	O15050	2925 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	RP1	P56715	2156 aa		11.52	□□□□□ -0.57
DDX11-223	ENST00000542838	IGKV1D-43	A0A0B4J1Z2	117 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	IGHV5-51	A0A0C4DH38	117 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	NPIPA5	E9PKD4	350 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838		H0YIZ8	118 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SYT7	O43581	403 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SNAPIN	O95295	136 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	COX15	Q7KZN9	410 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	HOGA1	Q86XE5	327 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	OR13C9	Q8NGT0	318 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	GPR119	Q8TDV5	335 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	C12orf57	Q99622	126 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MICU1	Q9BPX6	476 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	NICN1	Q9BSH3	213 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MTIF3	Q9H2K0	278 aa	Known RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	PDE7B	Q9NP56	450 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MMP26	Q9NRE1	261 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	NPIPA1	Q9UND3	350 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MYO9B	Q13459	2157 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	TRBV6-7	A0A0A0MS04	114 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	NUDT19	A8MXV4	375 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	OR2T1	O43869	369 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SCGN	O76038	276 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	NPBWR1	P48145	328 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	PNLIPRP3	Q17RR3	467 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ANGPTL5	Q86XS5	388 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF101	Q8IZC7	436 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	OR2I1P	Q8NGU4	316 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ZC3H10	Q96K80	434 aa	Known RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	LRRC61	Q9BV99	259 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	FOXQ1	Q9C009	403 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SEC16A	O15027	2179 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838		A6NIZ1	184 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MS4A18	H0YCH9	400 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	TTR	P02766	147 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	TBP	P20226	339 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	RFC3	P40938	356 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MMP16	P51512	607 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	EMP2	P54851	167 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	RAP1B	P61224	184 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	RAP1A	P62834	184 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MRPS21	P82921	87 aa	Known RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SLC9A3R2	Q15599	337 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	SGCA	Q16586	387 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MICB	Q29980	383 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	MS4A18	Q3C1V0	323 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM128	Q5BJH2	165 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	DEGS2	Q6QHC5	323 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	KLHL24	Q6TFL4	600 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	WDFY1	Q8IWB7	410 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ASB10	Q8WXI3	467 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	CDC6	Q99741	560 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	UQCC2	Q9BRT2	126 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ESRP2	Q9H6T0	727 aa	Known RBP	11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	UQCC1	Q9NVA1	299 aa		11.51	□□□□□ -0.57
DDX11-223	ENST00000542838	ADAP1	O75689	374 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	ABCD3	P28288	659 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	DCD	P81605	110 aa	Known RBP	11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms