RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SLC9A3R2Q15599 337 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 SGCAQ16586 387 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 PRSS42Q7Z5A4 293 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 ANKRD37Q7Z713 158 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 BHLHE23Q8NDY6 225 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 OR1S1Q8NH92 325 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 NUP50Q9UKX7 468 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 AUP1Q9Y679 476 aa12.14□□□□□ -0.47
BNIP3-202ENST00000540159 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
BNIP3-202ENST00000540159 STK17BO94768 372 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 GLB1P16278 677 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 C4BPBP20851 252 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 PTGS2P35354 604 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 TOMM20Q15388 145 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 C17orf82Q86X59 251 aaPredicted RBP12.13□□□□□ -0.47
BNIP3-202ENST00000540159 BATF2Q8N1L9 274 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 GPR84Q9NQS5 396 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
BNIP3-202ENST00000540159 CPAMD8Q8IZJ3 1885 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 A0A1W2PQD3 144 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 E9PLN8 166 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 IFNA6P05013 189 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF20P17024 532 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
BNIP3-202ENST00000540159 STARP49675 285 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 EMP2P54851 167 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 GLIPR1L1Q6UWM5 242 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 MVB12AQ96EY5 273 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
BNIP3-202ENST00000540159 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 COMMD9Q9P000 198 aa12.13□□□□□ -0.47
BNIP3-202ENST00000540159 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 MFSD2BA6NFX1 497 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 MPTX1A8MV57 137 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 MBTPS2O43462 519 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 NUDT21O43809 227 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 PHF19Q5T6S3 580 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 OR1M1Q8NGA1 313 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ST6GALNAC5Q9BVH7 336 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 DLSTP36957 453 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 DAP3P51398 398 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF121P58317 390 aaPredicted RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 OGFOD3Q6PK18 319 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF813Q6ZN06 617 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZC3H10Q96K80 434 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 UTP23Q9BRU9 249 aaKnown RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 FAM206AQ9NX38 181 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 RABL2AQ9UBK7 228 aaPredicted RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 RABL2BQ9UNT1 228 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 LHFPL6Q9Y693 200 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 TO15178 435 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ADAP1O75689 374 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 PMS2P2O95744 297 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 F10P00742 488 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 DHPSP49366 369 aaPredicted RBP12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CLDN6P56747 220 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM244Q5VVB8 128 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM200AQ86VY9 491 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ZNF283Q8N7M2 679 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 ST8SIA2Q92186 375 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 UPB1Q9UBR1 384 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 SESN1Q9Y6P5 492 aa12.12□□□□□ -0.47
BNIP3-202ENST00000540159 CFAP47Q6ZTR5 3102 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 F5H0A9 414 aaPredicted RBP12.11□□□□□ -0.47
BNIP3-202ENST00000540159 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 UEVLDQ8IX04 471 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 TMEM229BQ8NBD8 167 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 OR2AJ1Q8NGZ0 328 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 DSPP15924 2871 aaKnown RBP12.11□□□□□ -0.47
BNIP3-202ENST00000540159 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
BNIP3-202ENST00000540159 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
BNIP3-202ENST00000540159 QDPRP09417 244 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms