RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
VTN-202ENST00000539746 RIPPLY1Q0D2K3 151 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 LSAMPQ13449 338 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 FBXL19-AS1Q494R0 122 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 CCDC92Q53HC0 331 aaPredicted RBP10.3□□□□□ -0.76
VTN-202ENST00000539746 WDR38Q5JTN6 314 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 VWA1Q6PCB0 445 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 LYPD4Q6UWN0 246 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 TMEM108Q6UXF1 575 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 ZNF610Q8N9Z0 462 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
VTN-202ENST00000539746 CA5BP1Q8WTZ4 195 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 TMEM203Q969S6 136 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 TMEM106AQ96A25 262 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 PGLYRP3Q96LB9 341 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 DMRTA2Q96SC8 542 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 C1QTNF5Q9BXJ0 243 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 KCNJ16Q9NPI9 418 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 ERRFI1Q9UJM3 462 aaPredicted RBP10.3□□□□□ -0.76
VTN-202ENST00000539746 TINAGQ9UJW2 476 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 OSGIN2Q9Y236 505 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 KLHDC2Q9Y2U9 406 aa10.3□□□□□ -0.76
VTN-202ENST00000539746 NCKAP5O14513 1909 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 A0A096LPE4 126 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 TRBV5-5A0A0J9YX44 114 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 LOC107986453A0A1B0GWG9 222 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 C5orf49A4QMS7 147 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 TRIM64BA6NI03 449 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 LRRTM2O43300 516 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 TBX1O43435 398 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 ALX3O95076 343 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 GOSR1O95249 250 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 GPANK1O95872 356 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 SRMP19623 302 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 RAB3BP20337 219 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 CCL1P22362 96 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 PRKACBP22694 351 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 CRYGSP22914 178 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 THBS4P35443 961 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 TALDO1P37837 337 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 PRKXP51817 358 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 RPS25P62851 125 aaKnown RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 FABP5Q01469 135 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 LY6DQ14210 128 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 PPA1Q15181 289 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 CNN3Q15417 329 aaKnown RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 ZNF774Q6NX45 483 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 SEZ6L2Q6UXD5 910 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 SLC16A12Q6ZSM3 486 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 SPATC1Q76KD6 591 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 MRPL21Q7Z2W9 205 aaKnown RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 CXorf67Q86X51 503 aaPredicted RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 SEMA6DQ8NFY4 1073 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 SLC25A46Q96AG3 418 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 CEP19Q96LK0 163 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 CMTM3Q96MX0 182 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 WNT5BQ9H1J7 359 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 OR51E2Q9H255 320 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 CGGBP1Q9UFW8 167 aaPredicted RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 SF3B6Q9Y3B4 125 aaKnown RBP10.29□□□□□ -0.76
VTN-202ENST00000539746 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
VTN-202ENST00000539746 A0A075B6Q4 140 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 NOTOA8MTQ0 251 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 PSMD9O00233 223 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 GPX5O75715 221 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 SC5DO75845 299 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 LYZL6O75951 148 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 CLPXO76031 633 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 IGKV3-15P01624 115 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 HLA-HP01893 362 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 RAB3AP20336 220 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 PTAFRP25105 342 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 NTF4P34130 210 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 SDC2P34741 201 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 PSMB10P40306 273 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
VTN-202ENST00000539746 VBP1P61758 197 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 KRTAP27-1Q3LI81 207 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 ZNF404Q494X3 552 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 DDI2Q5TDH0 399 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 UNQ9370/PRO34162Q6UXP9 181 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 FAM57BQ71RH2 274 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 LINGO2Q7L985 606 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 PARP16Q8N5Y8 322 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
VTN-202ENST00000539746 PHF21AQ96BD5 680 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 SPSB1Q96BD6 273 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 DERL3Q96Q80 235 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 HIST1H2AAQ96QV6 131 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 UQCC2Q9BRT2 126 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 TTTY10Q9BZA0 68 aa10.28□□□□□ -0.76
VTN-202ENST00000539746 OPN3Q9H1Y3 402 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms