RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PAX7P23759 505 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 PSMB5P28074 263 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ADRA1AP35348 466 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ATP5OP48047 213 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 TRPC1P48995 793 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 DNASE1L1P49184 302 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CCR8P51685 355 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF140P52738 457 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CTBP2P56545 445 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 LMO4P61968 165 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 BTG2P78543 158 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 FUT7Q11130 342 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CDH17Q12864 832 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 GRB7Q14451 532 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 GSG1Q2KHT4 349 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 TCTEX1D4Q5JR98 221 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 LIPKQ5VXJ0 399 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 SLX4IPQ5VYV7 408 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF774Q6NX45 483 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 BTNL3Q6UXE8 466 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF562Q6V9R5 426 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 DNM1P46Q6ZS02 220 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CENPLQ8N0S6 344 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 PQLC3Q8N755 202 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 MFSD9Q8NBP5 474 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CTNNBL1Q8WYA6 563 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 RAPGEF5Q92565 580 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 STARD4Q96DR4 205 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 MUCL1Q96DR8 90 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 AKR1E2Q96JD6 320 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 OLFM3Q96PB7 478 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CCT8L2Q96SF2 557 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 PELOQ9BRX2 385 aaKnown RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 SUCNR1Q9BXA5 334 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 HCAR1Q9BXC0 346 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CAPS2Q9BXY5 557 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 COMMD4Q9H0A8 199 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 STMN4Q9H169 189 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-202ENST00000535689 RIBC2Q9H4K1 309 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 ACTR8Q9H981 624 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 LRRC40Q9H9A6 602 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 FN3KRPQ9HA64 309 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 NTN4Q9HB63 628 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 C1orf123Q9NWV4 160 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 MS4A12Q9NXJ0 267 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 NINJ2Q9NZG7 142 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 SPRR3Q9UBC9 169 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 TAC3Q9UHF0 121 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 IL20RAQ9UHF4 553 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 TMCC3Q9ULS5 477 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 TP53TG3Q9ULZ0 132 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 AURKCQ9UQB9 309 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 CFL2Q9Y281 166 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 AP4B1Q9Y6B7 739 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 NBEAL2Q6ZNJ1 2754 aa2.51□□□□□ -2.01
SNHG1-202ENST00000535689 VWFP04275 2813 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 TRAV9-2A0A087WT02 112 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 IGKV3D-11A0A0A0MRZ8 115 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 A0A1W2PNV4 684 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 PINLYPA6NC86 204 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 SLC22A20A6NK97 555 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 BTNL10A8MVZ5 291 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 B4DXG7 233 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 GFYI3L273 518 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 CDC7O00311 574 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 HAT1O14929 419 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 SCAMP2O15127 329 aaKnown RBP2.5□□□□□ -2.01
SNHG1-202ENST00000535689 PPIHO43447 177 aaKnown RBP2.5□□□□□ -2.01
SNHG1-202ENST00000535689 CST8O60676 142 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 UGT2B17O75795 530 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 KRT6BP04259 564 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 SERPIND1P05546 499 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 SERPINA6P08185 405 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 RHOXF2BP0C7M4 288 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 MPC1LP0DKB6 136 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 CCL3P10147 92 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 PSMB1P20618 241 aaKnown RBP2.5□□□□□ -2.01
SNHG1-202ENST00000535689 RPS3P23396 243 aaKnown RBP eCLIP2.5□□□□□ -2.01
SNHG1-202ENST00000535689 KRT6CP48668 564 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 POU3F4P49335 361 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 RGS4P49798 205 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 EFNA4P52798 201 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 RAG2P55895 527 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 RND3P61587 244 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 PSPHP78330 225 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 ASPHQ12797 758 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 COX10Q12887 443 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 KLHL38Q2WGJ6 581 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-202ENST00000535689 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 NCMAPQ5T1S8 102 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 UTF1Q5T230 341 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 TIGD3Q6B0B8 471 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 ZNF470Q6ECI4 717 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 OR5M10Q6IEU7 315 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 NIPAL3Q6P499 406 aa2.5□□□□□ -2.01
SNHG1-202ENST00000535689 REG3GQ6UW15 175 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms