RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 C1orf162Q8NEQ5 155 aaPredicted RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 OR5AK2Q8NH90 309 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 SLC30A2Q9BRI3 323 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 PLEK2Q9NYT0 353 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 CCDC59Q9P031 241 aaKnown RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 PROCRQ9UNN8 238 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 TIMM10BQ9Y5J6 103 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 PRR14LQ5THK1 2151 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
TPM3-217ENST00000504663 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 ZNF879B4DU55 563 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 M0R135 149 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 P2RY10O00398 339 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
TPM3-217ENST00000504663 RAD51DO75771 328 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 IL2RAP01589 272 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 COX5BP10606 129 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 ZNF14P17017 642 aaPredicted RBP9.03□□□□□ -0.96
TPM3-217ENST00000504663 SDC2P34741 201 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 OPRM1P35372 400 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 CA7P43166 264 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 MTNR1BP49286 362 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 PCBD1P61457 104 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 LSAMPQ13449 338 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 TNK1Q13470 666 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 Q499Y3 187 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 BCL2L15Q5TBC7 163 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 STAC2Q6ZMT1 411 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 CEACAM19Q7Z692 300 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 MDP1Q86V88 176 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 LYPD6Q86Y78 171 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
TPM3-217ENST00000504663 KBTBD8Q8NFY9 601 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 ASB5Q8WWX0 329 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 ZNF799Q96GE5 643 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 POM121L2Q96KW2 1035 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 NOX4Q9NPH5 578 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 MEMO1Q9Y316 297 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 RHBDD3Q9Y3P4 386 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 RELNP78509 3460 aa9.03□□□□□ -0.96
TPM3-217ENST00000504663 TRAV8-7A0A075B6U6 113 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 TRAV1-2A0A0B4J238 106 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 A0A1W2PPK0 400 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 A8MXE2 369 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 H3BSH0 61 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 GATBO75879 557 aaKnown RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 UBL3O95164 117 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 CDRT1O95170 752 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 IL1AP01583 271 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 CELA3BP08861 270 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 INHBBP09529 407 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 IGFBP3P17936 291 aaPredicted RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 ADRA2CP18825 462 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 APEX1P27695 318 aaKnown RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 CALRP27797 417 aaKnown RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 HSD11B1P28845 292 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 THBS2P35442 1172 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 HTR5AP47898 357 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 CAV3P56539 151 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 PER3P56645 1201 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 PMPCAQ10713 525 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 ECH1Q13011 328 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 ODF4Q2M2E3 257 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 SLC36A2Q495M3 483 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 ZNF529Q6P280 563 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 DRAM2Q6UX65 266 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 FAM57BQ71RH2 274 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 LRRTM1Q86UE6 522 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 ZNF283Q8N7M2 679 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 ZNF676Q8N7Q3 588 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 PHYHIPQ92561 330 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 SLC25A46Q96AG3 418 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 KCNS3Q9BQ31 491 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 VKORC1Q9BQB6 163 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 C1QTNF5Q9BXJ0 243 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 POFUT1Q9H488 388 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 GALNT8Q9NY28 637 aa9.02□□□□□ -0.97
TPM3-217ENST00000504663 CRNNQ9UBG3 495 aaPredicted RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 PLEKHB1Q9UF11 243 aaPredicted RBP9.02□□□□□ -0.97
TPM3-217ENST00000504663 KMT2BQ9UMN6 2715 aaPredicted RBP9.01□□□□□ -0.97
TPM3-217ENST00000504663 A0A0U1RQV5 110 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 A0A1W2PR80 420 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 A6NJY4 79 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 F5H5K5 113 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 MSTNO14793 375 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 PEX14O75381 377 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 NCR1O76036 304 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 SERPINA3P01011 423 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 IGLV1-44P01699 117 aa9.01□□□□□ -0.97
TPM3-217ENST00000504663 UBCP0CG48 685 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms