RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PLA2G2AP14555 144 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 PSMB1P20618 241 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 MSR1P21757 451 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 EVX1P49640 407 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 GABRA6Q16445 453 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 NRN1LQ496H8 165 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 FAM27BQ5VT28 67 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 LIPNQ5VXI9 398 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 SFXN4Q6P4A7 337 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 FDX2Q6P4F2 183 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 ANKRD16Q6P6B7 361 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 KLHL24Q6TFL4 600 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 DPY19L4Q7Z388 723 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 NR2C2APQ86WQ0 139 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 ZNF454Q8N9F8 522 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 ETAA1Q9NY74 926 aa14.79□□□□□ -0.04
EXOSC3-203ENST00000465229 A0A0G2JK05 382 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 SMIM30A4D0T7 59 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 NKX2-6A6NCS4 301 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 RAD51DO75771 328 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 RAB3BP20337 219 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 ASCL1P50553 236 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 PSMD7P51665 324 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 ALKBH1Q13686 389 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 FBXL19-AS1Q494R0 122 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 HIKESHIQ53FT3 197 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 FAM27D1Q5T7N8 215 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 SKA3Q8IX90 412 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 LRRC18Q8N456 261 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 ZNF808Q8N4W9 903 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 YIPF7Q8N8F6 280 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 BOD1Q96IK1 185 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 ZNF416Q9BWM5 594 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 KCNJ16Q9NPI9 418 aa14.78□□□□□ -0.04
EXOSC3-203ENST00000465229 ZNF593O00488 134 aaPredicted RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 PSKH1P11801 424 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 THBS2P35442 1172 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 PSMB10P40306 273 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 NANOS3P60323 173 aaKnown RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 LSM6P62312 80 aaKnown RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 ROM1Q03395 351 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 ENDOGQ14249 297 aaKnown RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 TEX30Q5JUR7 227 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 OR7E24Q6IFN5 339 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 SLC18B1Q6NT16 456 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 BHLHA15Q7RTS1 189 aaPredicted RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 OR8H2Q8N162 312 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 C1orf162Q8NEQ5 155 aaPredicted RBP14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 MAP6Q96JE9 813 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 PDCD1LG2Q9BQ51 273 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 PPP1R3EQ9H7J1 279 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 PRR14LQ5THK1 2151 aa14.77□□□□□ -0.04
EXOSC3-203ENST00000465229 RTTNQ86VV8 2226 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 NOTOA8MTQ0 251 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 HPGDSO60760 199 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 FARS2O95363 451 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 APOA1P02647 267 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 IL7P13232 177 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF823P16415 610 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 APEX1P27695 318 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 RPS27P42677 84 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 ADAM8P78325 824 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 SCN1BQ07699 218 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 SRSF1Q07955 248 aaKnown RBP eCLIP14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 PCK2Q16822 640 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 TBRG1Q3YBR2 411 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 HSD17B12Q53GQ0 312 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 IDNKQ5T6J7 187 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 CNIH2Q6PI25 160 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF554Q86TJ5 538 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 LRRC28Q86X40 367 aaPredicted RBP14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 OR10H5Q8NGA6 315 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 OR13C5Q8NGS8 318 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 FGFBP3Q8TAT2 258 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 THRSPQ92748 146 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 FBXO17Q96EF6 278 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 OR8B4Q96RC9 309 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF224Q9NZL3 707 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 CYB5R1Q9UHQ9 305 aa14.77□□□□□ -0.05
EXOSC3-203ENST00000465229 WIPF3A6NGB9 483 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 TMEM212A6NML5 194 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 C16orf97H3BN30 126 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 TMCC2O75069 709 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 ZFPL1O95159 310 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 CLDN14O95500 239 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 CST2P09228 141 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 IL32P24001 234 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 MAPK3P27361 379 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 KCTD18Q6PI47 426 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF679Q8IYX0 411 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 OR5AK2Q8NH90 309 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 THEM6Q8WUY1 208 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 C14orf119Q9NWQ9 140 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 ABRACLQ9P1F3 81 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 KCNG2Q9UJ96 466 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 IKZF2Q9UKS7 526 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 LHFPL6Q9Y693 200 aa14.76□□□□□ -0.05
EXOSC3-203ENST00000465229 TRBV5-5A0A0J9YX44 114 aa14.75□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF503-AS2A6NEH8 195 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms