RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 RORBQ92753 470 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 SLC41A3Q96GZ6 507 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 THUMPD3Q9BV44 507 aaKnown RBP-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 EDEM3Q9BZQ6 932 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 SIRPDQ9H106 197 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 SLC38A10Q9HBR0 1119 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF286AQ9HBT8 521 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 TREX1Q9NSU2 369 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 AIPL1Q9NZN9 384 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 NDUFA13Q9P0J0 144 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 TBK1Q9UHD2 729 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 RPL36Q9Y3U8 105 aaKnown RBP-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 U3KQ87 197 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 EIF4G1Q04637 1599 aaKnown RBP-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 DOCK1Q14185 1865 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 FRMPD4Q14CM0 1322 aa-0.72□□□□□ -2.52
TMEM56-204ENST00000463375 RTL1A6NKG5 1358 aa-0.72□□□□□ -2.53
TMEM56-204ENST00000463375 GOLGB1Q14789 3259 aaKnown RBP-0.72□□□□□ -2.53
TMEM56-204ENST00000463375 PLCH2O75038 1416 aa-0.72□□□□□ -2.53
TMEM56-204ENST00000463375 SIPA1L3O60292 1781 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ADAMTSL1Q8N6G6 1762 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 FYCO1Q9BQS8 1478 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 KNTC1P50748 2209 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PLXNC1O60486 1568 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 THADAQ6YHU6 1953 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 IGLV3-22A0A075B6J6 115 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 TRGV5A0A0B4J1U4 118 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 FAM92AA1XBS5 289 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 C9J4A7 227 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 H3BNG1 76 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SLC22A1O15245 554 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CHST10O43529 356 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SYNGR2O43760 224 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SSSCA1O60232 199 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DPM1O60762 260 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 UPK3AO75631 287 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ERC2-IT1O76042 136 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 GPR75O95800 540 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 TSPAN13O95857 204 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PDE6GP18545 87 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 LOXP28300 417 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PRDX2P32119 198 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 VHLP40337 213 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PTGFRP43088 359 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 UBE2E1P51965 193 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 NKX2-5P52952 324 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 KLF3P57682 345 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PDIA2Q13087 525 aaKnown RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 RGNQ15493 299 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CEBPEQ15744 281 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SLC15A2Q16348 729 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DEFB109BQ30KR1 87 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CEACAM21Q3KPI0 293 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 NADK2Q4G0N4 442 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 IBA57Q5T440 356 aaKnown RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CFAP161Q6P656 301 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PATE2Q6UY27 113 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CYHR1Q6ZMK1 362 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 EXOC3-AS1Q8N2X6 119 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 KIF2BQ8N4N8 673 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 WFDC9Q8NEX5 89 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SGMS2Q8NHU3 365 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 NANPQ8TBE9 248 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SDR42E1Q8WUS8 393 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DYNLL2Q96FJ2 89 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ZNF514Q96K75 400 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 Q96NJ1 140 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SERPINB11Q96P15 392 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ZBTB18Q99592 522 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SLC6A7Q99884 636 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 BAG1Q99933 345 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SH3GL3Q99963 347 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 TBCDQ9BTW9 1192 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CHCHD7Q9BUK0 85 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 MRPL32Q9BYC8 188 aaKnown RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 TTTY10Q9BZA0 68 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 FAM192AQ9GZU8 254 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 XKR8Q9H6D3 395 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 AZI2Q9H6S1 392 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DIABLOQ9NR28 239 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ETNK2Q9NVF9 386 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DDX18Q9NVP1 670 aaKnown RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 FAM206AQ9NX38 181 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PTTG3PQ9NZH4 202 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DNAJB9Q9UBS3 223 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ATP6V0A2Q9Y487 856 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 S4R3F8 94 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CITO14578 2027 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 USP42Q9H9J4 1324 aaKnown RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 CDC42BPAQ5VT25 1732 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 WDR90Q96KV7 1748 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 USF3Q68DE3 2245 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 SPATA31E1Q6ZUB1 1445 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ANKRD50Q9ULJ7 1429 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 DENND4BO75064 1496 aaPredicted RBP-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 ADGRL2O95490 1459 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 C1orf167Q5SNV9 1468 aa-0.73□□□□□ -2.53
TMEM56-204ENST00000463375 PLXND1Q9Y4D7 1925 aa-0.74□□□□□ -2.53
TMEM56-204ENST00000463375 SLIT2O94813 1529 aa-0.74□□□□□ -2.53
TMEM56-204ENST00000463375 ARHGEF12Q9NZN5 1544 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms