RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 AEBP2Q6ZN18 517 aaPredicted RBP13.7□□□□□ -0.22
TMEM56-204ENST00000463375 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
TMEM56-204ENST00000463375 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
TMEM56-204ENST00000463375 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
TMEM56-204ENST00000463375 FOXD1Q16676 465 aa10.97□□□□□ -0.65
TMEM56-204ENST00000463375 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
TMEM56-204ENST00000463375 MSH5O43196 834 aa10.43□□□□□ -0.74
TMEM56-204ENST00000463375 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
TMEM56-204ENST00000463375 PLPPR3Q6T4P5 718 aa10□□□□□ -0.81
TMEM56-204ENST00000463375 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
TMEM56-204ENST00000463375 ADRA2BP18089 450 aa9.92□□□□□ -0.82
TMEM56-204ENST00000463375 DMRT2Q9Y5R5 561 aa9.28□□□□□ -0.92
TMEM56-204ENST00000463375 MAPK8IP2Q13387 824 aaPredicted RBP9.19□□□□□ -0.94
TMEM56-204ENST00000463375 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
TMEM56-204ENST00000463375 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
TMEM56-204ENST00000463375 RNF39Q9H2S5 420 aa8.87□□□□□ -0.99
TMEM56-204ENST00000463375 HOXD11P31277 338 aaPredicted RBP8.82□□□□□ -1
TMEM56-204ENST00000463375 DCAF8L1A6NGE4 600 aa8.81□□□□□ -1
TMEM56-204ENST00000463375 C1QBPQ07021 282 aaKnown RBP8.72□□□□□ -1.01
TMEM56-204ENST00000463375 PPP4R3CPQ6ZMV5 832 aa8.69□□□□□ -1.02
TMEM56-204ENST00000463375 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
TMEM56-204ENST00000463375 DNAJC5BQ9UF47 199 aa8.64□□□□□ -1.03
TMEM56-204ENST00000463375 CNKSR2Q8WXI2 1034 aa8.63□□□□□ -1.03
TMEM56-204ENST00000463375 POTEHQ6S545 545 aa8.33□□□□□ -1.08
TMEM56-204ENST00000463375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
TMEM56-204ENST00000463375 NCBP3Q53F19 620 aaKnown RBP8.27□□□□□ -1.09
TMEM56-204ENST00000463375 DSG3P32926 999 aa8.18□□□□□ -1.1
TMEM56-204ENST00000463375 U3KPZ7 1027 aaPredicted RBP8.16□□□□□ -1.1
TMEM56-204ENST00000463375 NPM3O75607 178 aaKnown RBP8.15□□□□□ -1.1
TMEM56-204ENST00000463375 SPINK5Q9NQ38 1064 aaPredicted RBP8.11□□□□□ -1.11
TMEM56-204ENST00000463375 CAPN15O75808 1086 aa8.09□□□□□ -1.11
TMEM56-204ENST00000463375 ZNF219Q9P2Y4 722 aaPredicted RBP7.92□□□□□ -1.14
TMEM56-204ENST00000463375 APLP2Q06481 763 aa7.91□□□□□ -1.14
TMEM56-204ENST00000463375 ABCB7O75027 752 aa7.87□□□□□ -1.15
TMEM56-204ENST00000463375 SLC4A2P04920 1241 aa7.87□□□□□ -1.15
TMEM56-204ENST00000463375 TRHP20396 242 aaPredicted RBP7.87□□□□□ -1.15
TMEM56-204ENST00000463375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.83□□□□□ -1.16
TMEM56-204ENST00000463375 HNRNPUL2Q1KMD3 747 aaKnown RBP7.83□□□□□ -1.16
TMEM56-204ENST00000463375 RBM42Q9BTD8 480 aaKnown RBP7.83□□□□□ -1.16
TMEM56-204ENST00000463375 CHRDL2Q6WN34 429 aa7.77□□□□□ -1.17
TMEM56-204ENST00000463375 SAMD1Q6SPF0 538 aaPredicted RBP7.76□□□□□ -1.17
TMEM56-204ENST00000463375 KCNA4P22459 653 aa7.68□□□□□ -1.18
TMEM56-204ENST00000463375 SP7Q8TDD2 431 aaPredicted RBP7.67□□□□□ -1.18
TMEM56-204ENST00000463375 POLA2Q14181 598 aa7.6□□□□□ -1.19
TMEM56-204ENST00000463375 AKT1S1Q96B36 256 aa7.57□□□□□ -1.2
TMEM56-204ENST00000463375 MYCNP04198 464 aaPredicted RBP7.56□□□□□ -1.2
TMEM56-204ENST00000463375 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
TMEM56-204ENST00000463375 ZBTB12Q9Y330 459 aaPredicted RBP7.49□□□□□ -1.21
TMEM56-204ENST00000463375 REM2Q8IYK8 340 aaPredicted RBP7.48□□□□□ -1.21
TMEM56-204ENST00000463375 FXR2P51116 673 aaKnown RBP eCLIP7.43□□□□□ -1.22
TMEM56-204ENST00000463375 HAX1O00165 279 aa7.42□□□□□ -1.22
TMEM56-204ENST00000463375 PITPNM1O00562 1244 aa7.41□□□□□ -1.22
TMEM56-204ENST00000463375 OSCARQ8IYS5 282 aa7.41□□□□□ -1.22
TMEM56-204ENST00000463375 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
TMEM56-204ENST00000463375 EVX2Q03828 476 aa7.31□□□□□ -1.24
TMEM56-204ENST00000463375 FOXD4L1Q9NU39 408 aa7.3□□□□□ -1.24
TMEM56-204ENST00000463375 SPDYE2BA6NHP3 402 aa7.22□□□□□ -1.25
TMEM56-204ENST00000463375 SPDYE6P0CI01 402 aa7.22□□□□□ -1.25
TMEM56-204ENST00000463375 SPDYE2Q495Y8 402 aa7.22□□□□□ -1.25
TMEM56-204ENST00000463375 C19orf67A6NJJ6 358 aa7.21□□□□□ -1.26
TMEM56-204ENST00000463375 PRKAR2AP13861 404 aaKnown RBP7.19□□□□□ -1.26
TMEM56-204ENST00000463375 SLC4A1APQ9BWU0 796 aaKnown RBP7.18□□□□□ -1.26
TMEM56-204ENST00000463375 LHX8Q68G74 356 aa7.16□□□□□ -1.26
TMEM56-204ENST00000463375 SPDYE1Q8NFV5 336 aaPredicted RBP7.16□□□□□ -1.26
TMEM56-204ENST00000463375 GABBR2O75899 941 aa7.14□□□□□ -1.27
TMEM56-204ENST00000463375 ATXN8OSP0DMR3 200 aa7.14□□□□□ -1.27
TMEM56-204ENST00000463375 FBLN2P98095 1184 aa7.12□□□□□ -1.27
TMEM56-204ENST00000463375 SSUH2Q9Y2M2 353 aa7.11□□□□□ -1.27
TMEM56-204ENST00000463375 CLEC11AQ9Y240 323 aa7.09□□□□□ -1.27
TMEM56-204ENST00000463375 ZBTB22O15209 634 aa7.07□□□□□ -1.28
TMEM56-204ENST00000463375 MKRN4PQ13434 485 aaPredicted RBP7.04□□□□□ -1.28
TMEM56-204ENST00000463375 ZNF692Q9BU19 519 aaPredicted RBP7.02□□□□□ -1.29
TMEM56-204ENST00000463375 CHADLQ6NUI6 762 aa7.01□□□□□ -1.29
TMEM56-204ENST00000463375 POTEIP0CG38 1075 aa7□□□□□ -1.29
TMEM56-204ENST00000463375 CLCN6P51797 869 aa6.98□□□□□ -1.29
TMEM56-204ENST00000463375 PRR29P0C7W0 189 aa6.96□□□□□ -1.3
TMEM56-204ENST00000463375 CD44P16070 742 aaKnown RBP6.95□□□□□ -1.3
TMEM56-204ENST00000463375 PABPN1Q86U42 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
TMEM56-204ENST00000463375 PLSCR2Q9NRY7 297 aa6.92□□□□□ -1.3
TMEM56-204ENST00000463375 FARP1Q9Y4F1 1045 aaPredicted RBP6.91□□□□□ -1.3
TMEM56-204ENST00000463375 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
TMEM56-204ENST00000463375 DCBLD2Q96PD2 775 aa6.86□□□□□ -1.31
TMEM56-204ENST00000463375 OTUD5Q96G74 571 aa6.81□□□□□ -1.32
TMEM56-204ENST00000463375 ZRANB1Q9UGI0 708 aa6.78□□□□□ -1.32
TMEM56-204ENST00000463375 POTEMA6NI47 508 aa6.76□□□□□ -1.33
TMEM56-204ENST00000463375 GALR2O43603 387 aaPredicted RBP6.76□□□□□ -1.33
TMEM56-204ENST00000463375 POTEB2H3BUK9 544 aa6.75□□□□□ -1.33
TMEM56-204ENST00000463375 CREBZFQ9NS37 354 aa6.74□□□□□ -1.33
TMEM56-204ENST00000463375 POTEGQ6S5H5 508 aa6.73□□□□□ -1.33
TMEM56-204ENST00000463375 PCDH10Q9P2E7 1040 aa6.71□□□□□ -1.34
TMEM56-204ENST00000463375 STAG3Q9UJ98 1225 aa6.69□□□□□ -1.34
TMEM56-204ENST00000463375 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
TMEM56-204ENST00000463375 PHF12Q96QT6 1004 aa6.67□□□□□ -1.34
TMEM56-204ENST00000463375 PELP1Q8IZL8 1130 aaKnown RBP6.66□□□□□ -1.34
TMEM56-204ENST00000463375 ASTLQ6HA08 431 aaPredicted RBP6.64□□□□□ -1.35
TMEM56-204ENST00000463375 METRNQ9UJH8 293 aa6.63□□□□□ -1.35
TMEM56-204ENST00000463375 POTEJP0CG39 1038 aa6.62□□□□□ -1.35
TMEM56-204ENST00000463375 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
TMEM56-204ENST00000463375 C7P10643 843 aa6.61□□□□□ -1.35
TMEM56-204ENST00000463375 MNX1P50219 401 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms