RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CSF2RBP32927 897 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 GPR85P60893 370 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 GABREP78334 506 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 C17orf67Q0P5P2 114 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 CBLN2Q8IUK8 224 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 FAM219AQ8IW50 185 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 SYT3Q9BQG1 590 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 PUS1Q9Y606 427 aaKnown RBP eCLIP12.98□□□□□ -0.33
NCL-207ENST00000461347 SCN5AQ14524 2016 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 MFSD2BA6NFX1 497 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 KCNAB3O43448 404 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 EFEMP2O95967 443 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 SCAND1P57086 179 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
NCL-207ENST00000461347 C14orf28Q4W4Y0 310 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
NCL-207ENST00000461347 PGAP1Q75T13 922 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 TCTEX1D2Q8WW35 142 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 GPR84Q9NQS5 396 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 PRMT8Q9NR22 394 aaPredicted RBP12.98□□□□□ -0.33
NCL-207ENST00000461347 MED12Q93074 2177 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 STPG2Q8N412 459 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 ASB13Q8WXK3 278 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 ELSPBP1Q96BH3 223 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 BORCS8Q96FH0 119 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 PBX4Q9BYU1 374 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 SLC17A5Q9NRA2 495 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 C1orf123Q9NWV4 160 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 LUZP4Q9P127 313 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 C19orf25Q9UFG5 118 aaPredicted RBP12.98□□□□□ -0.33
NCL-207ENST00000461347 SCN8AQ9UQD0 1980 aa12.98□□□□□ -0.33
NCL-207ENST00000461347 A0A087WV48 116 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 C9orf170A2RU37 121 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 GLAP06280 429 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 HOXD4P09016 255 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 OMGP23515 440 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 RPS11P62280 158 aaKnown RBP eCLIP12.97□□□□□ -0.33
NCL-207ENST00000461347 TFF2Q03403 129 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 MFGE8Q08431 387 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 TERB2Q8NHR7 220 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ADAT1Q9BUB4 502 aaKnown RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 EXOSC3Q9NQT5 275 aaKnown RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 NDRG3Q9UGV2 375 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ZNF175Q9Y473 711 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 TNFSF14O43557 240 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 UPK3AO75631 287 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ABOP16442 354 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 CEBPEQ15744 281 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 C5orf46Q6UWT4 87 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 OR52N4Q8NGI2 321 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 GPX8Q8TED1 209 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 TM4SF19Q96DZ7 209 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 PBOV1Q9GZY1 135 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 HEXA-AS1Q9H8Q6 139 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ZFP57Q9NU63 452 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 PRR13Q9NZ81 148 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 B3GALT5Q9Y2C3 310 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 A0A1W2PNR3 127 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 FAM74A7A6NL05 159 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ADAM11O75078 769 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ADAP1O75689 374 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 CTRB1P17538 263 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 RPS10P46783 165 aaKnown RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 CAPZBP47756 277 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 FAM74A3Q4VXF1 159 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 Q6ZRG5 221 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 ZNF321PQ8N8H1 164 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 CDCA3Q99618 268 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 NIT2Q9NQR4 276 aa12.97□□□□□ -0.33
NCL-207ENST00000461347 GDF2Q9UK05 429 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
NCL-207ENST00000461347 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 LINC01565O15544 149 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 TNFSF12O43508 249 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 KIR3DL2P43630 455 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 MTCP1P56278 107 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 CLDN17P56750 224 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 DLX2Q07687 328 aaPredicted RBP12.96□□□□□ -0.33
NCL-207ENST00000461347 ISXQ2M1V0 245 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 EXOSC6Q5RKV6 272 aaKnown RBP12.96□□□□□ -0.33
NCL-207ENST00000461347 FBXW12Q6X9E4 464 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
NCL-207ENST00000461347 ASB5Q8WWX0 329 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms