RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	VENTX	O95231	258 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	CYB5R3	P00387	301 aa	Predicted RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	GAST	P01350	101 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	IGHV2-70	P01814	119 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	LCAT	P04180	440 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	HLA-DPB1	P04440	258 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	GYPB	P06028	91 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ADH4	P08319	380 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	SPARC	P09486	303 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	PSKH1	P11801	424 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	EPHA1	P21709	976 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	THBS2	P35442	1172 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	SEC61A1	P61619	476 aa	Known RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	BTG1	P62324	171 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	MS4A2	Q01362	244 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	TRAP1	Q12931	704 aa	Known RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ZMYND11	Q15326	602 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	FAM98B	Q52LJ0	330 aa	Known RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	SPATC1	Q76KD6	591 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	NAA40	Q86UY6	237 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ZBTB46	Q86UZ6	589 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	LNX2	Q8N448	690 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	KLHL36	Q8N4N3	616 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF283	Q8N7M2	679 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC37A3	Q8NCC5	494 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	OR4C15	Q8NGM1	316 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	OR6K6	Q8NGW6	343 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNRF4	Q8WWF5	429 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	C22orf15	Q8WYQ4	148 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	OTULIN	Q96BN8	352 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	MAP6	Q96JE9	813 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	LRGUK	Q96M69	825 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF582	Q96NG8	517 aa	Predicted RBP	7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	TSSK6	Q9BXA6	273 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	HCAR1	Q9BXC0	346 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	TMPRSS13	Q9BYE2	586 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	C7orf69	Q9H7B7	122 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	REEP1	Q9H902	201 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	G6PC2	Q9NQR9	355 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	ARMC1	Q9NVT9	282 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	IL19	Q9UHD0	177 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	IQCF6	A8MYZ5	107 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859		M0R135	149 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	BHLHE40	O14503	412 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MLNR	O43193	412 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	IDH3B	O43837	385 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	ACSM4	P0C7M7	580 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	CLU	P10909	449 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC2A1	P11166	492 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	CALB2	P22676	271 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	TUBG1	P23258	451 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	ZFP36	P26651	326 aa	Known RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	GGT2	P36268	569 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MAGEA2	P43356	314 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	TPTE	P56180	551 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MALL	Q13021	153 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	CRMP1	Q14194	572 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	GK2	Q14410	553 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	TAF13	Q15543	124 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	RSPO1	Q2MKA7	263 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SPATS1	Q496A3	300 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	FAM201A	Q5SY85	155 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	LCN8	Q6JVE9	175 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	RPL13AP3	Q6NVV1	102 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	FBXW12	Q6X9E4	464 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	RASSF6	Q6ZTQ3	369 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MRPL21	Q7Z2W9	205 aa	Known RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	DCXR	Q7Z4W1	244 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MOGAT3	Q86VF5	341 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	LINC00471	Q8N535	108 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SPIC	Q8N5J4	248 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	IQCF1	Q8N6M8	205 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	C19orf18	Q8NEA5	215 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR8G5	Q8NG78	346 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR10S1	Q8NGN2	331 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR13G1	Q8NGZ3	307 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2T4	Q8NH00	348 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR4Q3	Q8NH05	313 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2AE1	Q8NHA4	323 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF418	Q8TF45	676 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	DVL3	Q92997	716 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SLCO4A1	Q96BD0	722 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF799	Q96GE5	643 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MEGF10	Q96KG7	1140 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SIGLEC11	Q96RL6	698 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC6A7	Q99884	636 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MED20	Q9H944	212 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	GCM1	Q9NP62	436 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	PNRC2	Q9NPJ4	139 aa	Known RBP	7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	MMP26	Q9NRE1	261 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	TUBG2	Q9NRH3	451 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	UFSP2	Q9NUQ7	469 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	CYB5R1	Q9UHQ9	305 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	ATPIF1	Q9UII2	106 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	COMMD3-BMI1	R4GMX3	469 aa		7.3	□□□□□ -1.24
RFX3-209	ENST00000451859	TENM1	Q9UKZ4	2725 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	C5orf63	A6NC05	138 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	FAM183A	A6NL82	134 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms