RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UBR1Q8IWV7 1749 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 SEMA7AO75326 666 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 UTS2O95399 124 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 IGHG1P01857 330 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 KLKB1P03952 638 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 RPL29P47914 159 aaKnown RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 FABP6P51161 128 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 RTP2Q5QGT7 225 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 CYB5R2Q6BCY4 276 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 LINC01465Q8N7H1 131 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 LHX4Q969G2 390 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 SERTAD4Q9NUC0 356 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 CPEB2Q7Z5Q1 589 aaKnown RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 ZNF740Q8NDX6 193 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 CCDC74AQ96AQ1 378 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NRIP2Q9BQI9 281 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NUP98P52948 1817 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 TRBV5-4A0A0C4DH59 114 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 HOXB3P14651 431 aaPredicted RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 EGR3Q06889 387 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 ARIH2OSQ8N7S6 290 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NUBPLQ8TB37 319 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 ACTR3CQ9C0K3 210 aaPredicted RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 CSPG4Q6UVK1 2322 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 ICOSLGO75144 302 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 BSGP35613 385 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NAAAQ02083 359 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 SLC38A9Q8NBW4 561 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 VAMP8Q9BV40 100 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 FBXL17Q9UF56 701 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 PCDHGA1Q9Y5H4 931 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 LOC107986453A0A1B0GWG9 222 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 A0A1W2PPV4 95 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 G3V3Q6 166 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NOVA1P51513 510 aaKnown RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 KRTDAPP60985 99 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 TMEM31Q5JXX7 168 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 ARV1Q9H2C2 271 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 HRASLS2Q9NWW9 162 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 NPTNQ9Y639 398 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 KCNAB3O43448 404 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.26
SMG1-202ENST00000446231 MLF1P58340 268 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 DHODHQ02127 395 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 CAPNS2Q96L46 248 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 UBQLN4Q9NRR5 601 aa7.15□□□□□ -1.26
SMG1-202ENST00000446231 OTOGLQ3ZCN5 2332 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 LPAR6P43657 344 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 IL10RAQ13651 578 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 PMS2P11Q13670 270 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 REG4Q9BYZ8 158 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 WWTR1Q9GZV5 400 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 KLRF1Q9NZS2 232 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 WSB1Q9Y6I7 421 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 RNF212BA8MTL3 300 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 CLDN1O95832 211 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 CRHP06850 196 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 PRF1P14222 555 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 FLT3LGP49771 235 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 VASPP50552 380 aaPredicted RBP7.15□□□□□ -1.27
SMG1-202ENST00000446231 DUSP5Q16690 384 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 OR51A2Q8NGJ7 313 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 WNT6Q9Y6F9 365 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 NTN1O95631 604 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 HLA-DOBP13765 273 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 Q6ZN92 141 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 ZNF596Q8TC21 504 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 SPTSSAQ969W0 71 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 SOSTQ9BQB4 213 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 ZNF320A2RRD8 509 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 SFT2D2O95562 160 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 ZNF845Q96IR2 970 aaPredicted RBP7.15□□□□□ -1.27
SMG1-202ENST00000446231 RAB33BQ9H082 229 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 C20orf141Q9NUB4 165 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 DDNO94850 711 aaPredicted RBP7.15□□□□□ -1.27
SMG1-202ENST00000446231 SURF2Q15527 256 aaPredicted RBP7.15□□□□□ -1.27
SMG1-202ENST00000446231 EMC4Q5J8M3 183 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 NUP188Q5SRE5 1749 aa7.15□□□□□ -1.27
SMG1-202ENST00000446231 NDUFA2O43678 99 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 TMEM25Q86YD3 366 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 PARP11Q9NR21 331 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 R4GMQ9 66 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 H0YGG7 62 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 PLPP1O14494 284 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 WNT11O96014 354 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 ADH1BP00325 375 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 PSMB5P28074 263 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 MDFIC2A0A1B0GVS7 189 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 HLA-DRB3P79483 266 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 AGERQ15109 404 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 TMPPEQ6ZT21 453 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 DYRK2Q92630 601 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 TMEM241Q24JQ0 296 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 SLC48A1Q6P1K1 146 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 GRINAQ7Z429 371 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 SLC35G3Q8N808 338 aa7.14□□□□□ -1.27
SMG1-202ENST00000446231 CMBLQ96DG6 245 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms