RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 METTL27Q8N6F8 245 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PNLDC1Q8NA58 520 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HPSE2Q8WWQ2 592 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SMARCD2Q92925 531 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SNX22Q96L94 193 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 RARRES2Q99969 163 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PLA2G2EQ9NZK7 142 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CHRNA9Q9UGM1 479 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 GDF2Q9UK05 429 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HS3ST2Q9Y278 367 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 OR4C45A6NMZ5 311 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 MFNGO00587 321 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 EREGO14944 169 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 UPK3AO75631 287 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 DBIP07108 87 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF735P0CB33 412 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 FOLR2P14207 255 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TAGLN2P37802 199 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 GRK6P43250 576 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 DCAF7P61962 342 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PDGFRLQ15198 375 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 COMMD2Q86X83 199 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF101Q8IZC7 436 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PRSS35Q8N3Z0 413 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SLC2A12Q8TD20 617 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SFXN5Q8TD22 340 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ST6GALNAC5Q9BVH7 336 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CENPMQ9NSP4 180 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 STARD5Q9NSY2 213 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HCFC1R1Q9NWW0 138 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CKLFQ9UBR5 152 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 FBXL17Q9UF56 701 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HSF4Q9ULV5 492 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 B9D1Q9UPM9 204 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 GPR89AB7ZAQ6 455 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 C1QTNF3-AMACRE9PGA6 284 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PRAMEF26H0Y7S4 382 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM189-UBE2V1I3L0A0 370 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 GPR89BP0CG08 455 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HOXA5P20719 270 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 FCGR2CP31995 323 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CDX1P47902 265 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CSNK1EP49674 416 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SOHLH1Q5JUK2 328 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 LPCAT3Q6P1A2 487 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PRSS41Q7RTY9 318 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF610Q8N9Z0 462 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM229BQ8NBD8 167 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 AGBL5Q8NDL9 886 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SLC24A4Q8NFF2 622 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 OR10G6Q8NH81 332 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 SCARF2Q96GP6 870 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 DCBLD2Q96PD2 775 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 PRRT1Q99946 306 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 CHST5Q9GZS9 411 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ALX4Q9H161 411 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 KIAA1671Q9BY89 1806 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 A0A1W2PPV9 198 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 A6NNC1 897 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 CCL16O15467 120 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 EFSO43281 561 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 GLCEO94923 617 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 AHSA1O95433 338 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 FCGR3AP08637 254 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 CXCL1P09341 107 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 PPP1CCP36873 323 aaKnown RBP6.75□□□□□ -1.33
HDAC9-214ENST00000441542 KIR3DL2P43630 455 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 PPICP45877 212 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 STARD6P59095 220 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 SPCS3P61009 180 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 RPS23P62266 143 aaKnown RBP6.75□□□□□ -1.33
HDAC9-214ENST00000441542 NKAIN1Q4KMZ8 207 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 EIF5AL1Q6IS14 154 aaKnown RBP6.75□□□□□ -1.33
HDAC9-214ENST00000441542 SLC25A42Q86VD7 318 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 RNF113BQ8IZP6 322 aaKnown RBP6.75□□□□□ -1.33
HDAC9-214ENST00000441542 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 SUMF2Q8NBJ7 301 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 OR2L5Q8NG80 312 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 ADAMTS17Q8TE56 1095 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 CASD1Q96PB1 797 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 C1orf198Q9H425 327 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM100Q9NV29 134 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 HAO2Q9NYQ3 351 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 IL17BQ9UHF5 180 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 RAB22AQ9UL26 194 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 SMCO3A2RU48 225 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF587BE7ETH6 402 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 H0YL77 283 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 K7EPK0 472 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 SLC17A2O00624 439 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 LILRB5O75023 590 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 CLEC3AO75596 197 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 DIRAS3O95661 229 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 PNPP00491 289 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 GLRA1P23415 457 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 HOXC8P31273 242 aa6.75□□□□□ -1.33
HDAC9-214ENST00000441542 TLX1P31314 330 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms