RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CHD6Q8TD26 2715 aa7.77□□□□□ -1.17
SNCA-206ENST00000420646 COL27A1Q8IZC6 1860 aaPredicted RBP7.77□□□□□ -1.17
SNCA-206ENST00000420646 SVILO95425 2214 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 A0A1B0GTI1 187 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 WIPF3A6NGB9 483 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GSTZ1O43708 216 aaPredicted RBP7.76□□□□□ -1.17
SNCA-206ENST00000420646 TNFSF15O95150 251 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 DHFRP00374 187 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 HRGP04196 525 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 RAB40ALP0C0E4 278 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GDF1P27539 372 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CX3CR1P49238 355 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SRSF6Q13247 344 aaKnown RBP7.76□□□□□ -1.17
SNCA-206ENST00000420646 SSPNQ14714 243 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 HIST3H3Q16695 136 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 C9orf135Q5VTT2 229 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 FAM166AQ6J272 317 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ZNF283Q8N7M2 679 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 OR4S1Q8NGB4 309 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GRPEL2Q8TAA5 225 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 RAB40AQ8WXH6 277 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SCMH1Q96GD3 660 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SFXN2Q96NB2 322 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SPRY4Q9C004 299 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 OR51J1Q9H342 316 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 PIEZO2Q9H5I5 2752 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 LOC100509620A0A075B734 347 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 TMEM235A6NFC5 223 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 NPIPB13A6NJU9 1138 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 FAM166BA8MTA8 275 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 NPIPB4C9JG80 1138 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 M0QYG6 137 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SSNA1O43805 119 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GFRA3O60609 400 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 MT-CO3P00414 261 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CD3DP04234 171 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ITGA3P26006 1051 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CARD18P57730 90 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 C3AR1Q16581 482 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GLT8D1Q68CQ7 371 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 GGNQ86UU5 652 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ELMOD2Q8IZ81 293 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CRLF2Q9HC73 371 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ACACAQ13085 2346 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ARID1AO14497 2285 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CCDC187A0A096LP49 1063 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ANKRD20A5PA0PJZ0 165 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ZNF878C9JN71 531 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 CTDSPLO15194 276 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 TSC22D2O75157 780 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 PMS2P2O95744 297 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ITGB2P05107 769 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 PSMB1P20618 241 aaKnown RBP7.76□□□□□ -1.17
SNCA-206ENST00000420646 RAC1P63000 192 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 RSPO1Q2MKA7 263 aaPredicted RBP7.76□□□□□ -1.17
SNCA-206ENST00000420646 SFRP5Q5T4F7 317 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 ZNF813Q6ZN06 617 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 UXS1Q8NBZ7 420 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 NAXEQ8NCW5 288 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 PRSS33Q8NF86 280 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 OR11H4Q8NGC9 324 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 OR4C16Q8NGL9 310 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 FBXO17Q96EF6 278 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 SGCZQ96LD1 299 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 PIGQQ9BRB3 760 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 NOX3Q9HBY0 568 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 NUBP2Q9Y5Y2 271 aa7.76□□□□□ -1.17
SNCA-206ENST00000420646 RELNP78509 3460 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ACOT7O00154 380 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 RBBP9O75884 186 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 NEURL1O76050 574 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ISG15P05161 165 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 GTF2F2P13984 249 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ACHEP22303 614 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 FAPQ12884 760 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 TMEM244Q5VVB8 128 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 OLFML2AQ68BL7 652 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ZNF704Q6ZNC4 412 aaPredicted RBP7.75□□□□□ -1.17
SNCA-206ENST00000420646 PAQR4Q8N4S7 273 aaPredicted RBP7.75□□□□□ -1.17
SNCA-206ENST00000420646 GVQW1Q8N7I0 195 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 TMEM104Q8NE00 496 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 OR51S1Q8NGJ8 323 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 OR10D3Q8NH80 312 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 NICN1Q9BSH3 213 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 CHST6Q9GZX3 395 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 BANF2Q9H503 90 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 DIABLOQ9NR28 239 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 HSPB11Q9Y547 144 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ETV7Q9Y603 341 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 MYO18BQ8IUG5 2567 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 PYCARD-AS1I3L0S3 204 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 SERPINA7P05543 415 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 UBCP0CG48 685 aaKnown RBP7.75□□□□□ -1.17
SNCA-206ENST00000420646 B4GALT1P15291 398 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 ZP1P60852 638 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 FOXO1Q12778 655 aa7.75□□□□□ -1.17
SNCA-206ENST00000420646 UNC119Q13432 240 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms