RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 UPK3AO75631 287 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF823P16415 610 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF133P52736 654 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 SCAND1P57086 179 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 AP3S2P59780 193 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF585AQ6P3V2 769 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 OR56B4Q8NH76 319 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 HSD17B8Q92506 261 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 OR51J1Q9H342 316 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 SEC61A2Q9H9S3 476 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 LAMP5Q9UJQ1 280 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 IFITM5A6NNB3 132 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 DHHO43323 396 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 HRGP04196 525 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 CALCBP10092 127 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 ANXA3P12429 323 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 CDAP32320 146 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 MNDAP41218 407 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 DGCR2P98153 550 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 SNTB2Q13425 540 aaKnown RBP17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 FCN2Q15485 313 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 C10orf128Q5T292 105 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 GPR137CQ8N3F9 429 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 RAB40AQ8WXH6 277 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 C11orf40Q8WZ69 217 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 SLC25A18Q9H1K4 315 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 NOX4Q9NPH5 578 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 ATMQ13315 3056 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 BOD1L1Q8NFC6 3051 aa17.02■□□□□ 0.31
PDLIM2-204ENST00000397760 SPARCP09486 303 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 CD3GP09693 182 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 SRP9P49458 86 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 OTOSQ8NHW6 89 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 LGALS14Q8TCE9 139 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 SNRNP40Q96DI7 357 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 PDCD1LG2Q9BQ51 273 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 RBM24Q9BX46 236 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 GP6Q9HCN6 339 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 KCNG2Q9UJ96 466 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 KLHDC2Q9Y2U9 406 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 AK6Q9Y3D8 172 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 TMEM14AQ9Y6G1 99 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 CHD8Q9HCK8 2581 aa17.01■□□□□ 0.31
PDLIM2-204ENST00000397760 A6NIN4 97 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GABARAPH6UMI1 98 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 PRAF2O60831 178 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 H2AFB2P0C5Z0 115 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 ALOX5APP20292 161 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 ACSF3Q4G176 576 aaPredicted RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 FAM220AQ7Z4H9 259 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 LUZP2Q86TE4 346 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 C9orf62Q8N4C0 152 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 OR10H5Q8NGA6 315 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 THEM6Q8WUY1 208 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 THRSPQ92748 146 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GMPPAQ96IJ6 420 aaPredicted RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 ZFP3Q96NJ6 502 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 DERL3Q96Q80 235 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 SLITRK2Q9H156 845 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 HSPB11Q9Y547 144 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 ETV7Q9Y603 341 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 PIN1P1O15428 100 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 MAGEB4O15481 346 aaPredicted RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 FABP7O15540 132 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 TPOP07202 933 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GIFP27352 417 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GUCA1AP43080 201 aaPredicted RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 TDGF1P3P51864 188 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 KLRB1Q12918 225 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 IKZF1Q13422 519 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GSG1Q2KHT4 349 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 ELFN2Q5R3F8 820 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 NUFIP2Q7Z417 695 aaKnown RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 WNT2BQ93097 391 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 ALKBH3Q96Q83 286 aaPredicted RBP17■□□□□ 0.31
PDLIM2-204ENST00000397760 SLCO5A1Q9H2Y9 848 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 CRLF2Q9HC73 371 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 GLRX2Q9NS18 164 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 V9GY05 133 aa17■□□□□ 0.31
PDLIM2-204ENST00000397760 TRAV6A0A075B6T7 132 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 PHYHO14832 338 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 KRT33AO76009 404 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 RAF1P04049 648 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 AGTR1P30556 359 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 ZNF84P51523 738 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 TEX30Q5JUR7 227 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 RIPPLY2Q5TAB7 128 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 TSPO2Q5TGU0 170 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 SLC18B1Q6NT16 456 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 CMTM4Q8IZR5 234 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 DTX3Q8N9I9 347 aa16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 RNF166Q96A37 237 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 ZNF837Q96EG3 531 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-204ENST00000397760 A0A1W2PPK0 400 aa16.98■□□□□ 0.31
PDLIM2-204ENST00000397760 OR6C65A6NJZ3 312 aa16.98■□□□□ 0.31
PDLIM2-204ENST00000397760 IGHV3-9P01782 118 aa16.98■□□□□ 0.31
PDLIM2-204ENST00000397760 GABRA1P14867 456 aa16.98■□□□□ 0.31
PDLIM2-204ENST00000397760 GDNFP39905 211 aa16.98■□□□□ 0.31
PDLIM2-204ENST00000397760 CCR9P51686 369 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms