RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 VRK3Q8IV63 474 aa11.89□□□□□ -0.51
PLXNA1-201ENST00000393409 FITM1A5D6W6 292 aa11.89□□□□□ -0.51
PLXNA1-201ENST00000393409 C19orf53Q9UNZ5 99 aaPredicted RBP11.89□□□□□ -0.51
PLXNA1-201ENST00000393409 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 A0A1W2PR64 198 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 NTF3P20783 257 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CSNK1G2P78368 415 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 GSG1Q2KHT4 349 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 STPG2Q8N412 459 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 HLA-CQ95604 372 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 TPPP3Q9BW30 176 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 NUDT9Q9BW91 350 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 PTBP3O95758 552 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CXCL12P48061 93 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 TCTN3Q6NUS6 607 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 NLGN4YQ8NFZ3 816 aaPredicted RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 TTC9Q92623 222 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 NSG1A0A0A6YYJ2 146 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 PYCARD-AS1I3L0S3 204 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 AP4M1O00189 453 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 MBTPS2O43462 519 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 GABRA4P48169 554 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 BTLAQ7Z6A9 289 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 LRP3O75074 770 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 HEXAP06865 529 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 SELEP16581 610 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RPL34P49207 117 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 SSR4P51571 173 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 DMWDQ09019 674 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 PAQR9Q6ZVX9 377 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 LRRTM1Q86UE6 522 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 LINC00303Q3SY05 128 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RBM45Q8IUH3 476 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 RAB18Q9NP72 206 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CHST11Q9NPF2 352 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 FXYD1O00168 92 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 B4GALT3O60512 393 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CTNSO60931 367 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 KIR3DX1Q9H7L2 352 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CSN1S1P47710 185 aa11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 CISD2Q8N5K1 135 aaKnown RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
PLXNA1-201ENST00000393409 DOK2O60496 412 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 PTHLHP12272 177 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 CD46P15529 392 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 FAAP20Q6NZ36 180 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 NKAIN4Q8IVV8 208 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 S1PR5Q9H228 398 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 ZNF385DQ9H6B1 395 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 ISG20L2Q9H9L3 353 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 RXFP4Q8TDU9 374 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 NTNG2Q96CW9 530 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 Q96M85 177 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 LINC00597Q9H2U6 94 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 A0A087WV62 115 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 PCBP4P57723 403 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 METRNLQ641Q3 311 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 CALHM3Q86XJ0 350 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 NXPH3O95157 252 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 ZNF154Q13106 437 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 PLA2G12AQ9BZM1 189 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 SNRNP200O75643 2136 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 PCMT1P22061 227 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 SNRPEP62304 92 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 BANF2Q9H503 90 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 KRTDAPP60985 99 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 CTBSQ01459 385 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 CPEB2Q7Z5Q1 589 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 DUSP18Q8NEJ0 188 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 OR5M1Q8NGP8 315 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 SCMH1Q96GD3 660 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 SDF2Q99470 211 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 MRPS21P82921 87 aaKnown RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 DUSP5Q16690 384 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 HSF5Q4G112 596 aaPredicted RBP11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
PLXNA1-201ENST00000393409 DGAT2L6Q6ZPD8 337 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms