RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LHX8Q68G74 356 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 C1orf87Q8N0U7 546 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SARAFQ96BY9 339 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 NKX6-2Q9C056 277 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 DEFB127Q9H1M4 99 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 MED9Q9NWA0 146 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 FLVCR2Q9UPI3 526 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 N4BP2Q86UW6 1770 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 UBE2MP61081 183 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 KIAA0141Q14154 515 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SKA3Q8IX90 412 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 TDHQ8IZJ6 230 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 MFSD4AQ8N468 514 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 CPEB3Q8NE35 698 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 OSGIN2Q9Y236 505 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 STRAPQ9Y3F4 350 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 TJP1Q07157 1748 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 E5RGE8 158 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 RPL12P30050 165 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SNRPNP63162 240 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 NKG7Q16617 165 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 EXD3Q8N9H8 876 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SLC35E1Q96K37 410 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 ARHGDIGQ99819 225 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 NSG2Q9Y328 171 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 URGCP-MRPS24S4R325 110 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SPTY2D1-AS1A0A0U1RR47 76 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 RAB27BO00194 218 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 ADAM10O14672 748 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 HRH1P35367 487 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 FAM74A1Q5RGS3 127 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 C12orf73Q69YU5 71 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 GPX8Q8TED1 209 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 REEP6Q96HR9 211 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 C1QTNF6Q9BXI9 259 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 IL20Q9NYY1 176 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 GDF2Q9UK05 429 aaPredicted RBP14.52□□□□□ -0.08
COL2A1-202ENST00000380518 ING1Q9UK53 422 aaPredicted RBP14.52□□□□□ -0.08
COL2A1-202ENST00000380518 A4GNTQ9UNA3 340 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 MEIKINA0A087WXM9 373 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 H7BYZ3 331 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 CNIH1O95406 144 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 OR10J4P0C629 311 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 CD80P33681 288 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 TMEM268Q5VZI3 342 aa14.52□□□□□ -0.08
COL2A1-202ENST00000380518 PPP5D1E7EU14 171 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 LMO7DNF2Z398 122 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 NME2P1O60361 137 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 DCTDP32321 178 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 AUNIPQ9H7T9 357 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 DLL4Q9NR61 685 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 TMEFF2Q9UIK5 374 aaPredicted RBP14.52□□□□□ -0.09
COL2A1-202ENST00000380518 RNF150Q9ULK6 438 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 IL2RAP01589 272 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 CRYAAP02489 173 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 PI3P19957 117 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 SPANXN5Q5MJ07 72 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 THNSL2Q86YJ6 484 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 BAP18Q8IXM2 172 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 SPEM1Q8N4L4 309 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 MARCH1Q8TCQ1 289 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 ASB13Q8WXK3 278 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 C20orf24Q9BUV8 137 aa14.52□□□□□ -0.09
COL2A1-202ENST00000380518 IGLV3-16A0A075B6K0 115 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 PPM1DO15297 605 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF354AO60765 605 aaPredicted RBP14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ARL16Q0P5N6 197 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 CTF1Q16619 201 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ARHGEF39Q8N4T4 335 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 DERL3Q96Q80 235 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 PRDM7Q9NQW5 492 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 SLC23A1Q9UHI7 598 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 SLX4Q8IY92 1834 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 SIRPB1O00241 398 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 BHLHE40O14503 412 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ADRB1P08588 477 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 AGFG1P52594 562 aaKnown RBP14.51□□□□□ -0.09
COL2A1-202ENST00000380518 CLDN15P56746 228 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 TOMM34Q15785 309 aaPredicted RBP14.51□□□□□ -0.09
COL2A1-202ENST00000380518 A0A087WUJ7 227 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 A0A096LPE4 126 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 A0A1W2PPZ6 126 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 PRRG2O14669 202 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 XRCC3O43542 346 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ADH4P08319 380 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 FOXF1Q12946 379 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 FAM185AQ8N0U4 392 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 CORO2AQ92828 525 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 FGF14Q92915 247 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ZC3HAV1LQ96H79 300 aaKnown RBP14.51□□□□□ -0.09
COL2A1-202ENST00000380518 TPPP3Q9BW30 176 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 FOXQ1Q9C009 403 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 PPP1R3CQ9UQK1 317 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 ADAMTSL3P82987 1691 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 SLC17A2O00624 439 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 HRO43593 1189 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 TBX19O60806 448 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 CBR3O75828 277 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 MGMTP16455 207 aa14.51□□□□□ -0.09
COL2A1-202ENST00000380518 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms