RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SSR4P51571 173 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 OR2A2Q6IF42 318 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 DOK3Q7L591 496 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 MRPS16Q9Y3D3 137 aaKnown RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 SOX21Q9Y651 276 aaPredicted RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 HMGN2P05204 90 aaKnown RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 VASPP50552 380 aaPredicted RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 UMODL1-AS1Q8N2C9 162 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 CLMPQ9H6B4 373 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 SPHK2Q9NRA0 654 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 EXOSC7Q15024 291 aaKnown RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 XRN1Q8IZH2 1706 aaKnown RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 TRAV36DV7A0A075B6V5 113 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 DUXBA0A1W2PPF3 345 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 LAMTOR5O43504 91 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 CD40P25942 277 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 INHBCP55103 352 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 COX19Q49B96 90 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 MOGAT1Q96PD6 335 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 IGSF5Q9NSI5 407 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 SMPD1P17405 629 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 RRADP55042 308 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 PSAPL1Q6NUJ1 521 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 AAED1Q7RTV5 226 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 ABI3BPQ7Z7G0 1075 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 NAA60Q9H7X0 242 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 SOWAHBA6NEL2 793 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 HIST1H1BP16401 226 aaKnown RBP7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 PRAMEF20Q5VT98 475 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 C9orf135Q5VTT2 229 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 GALNT16Q8N428 558 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 GLIS1Q8NBF1 620 aa7.71□□□□□ -1.18
NCKAP1-202ENST00000361354 FAM71CQ8NEG0 241 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SMG9Q9H0W8 520 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SLC5A10A0PJK1 596 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PRSS1P07477 247 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 TMEM251Q8N6I4 163 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 RAD52P43351 418 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 C21orf58P58505 322 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SMIM21Q3B7S5 101 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NMNAT3Q96T66 252 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 UTP23Q9BRU9 249 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 DUSP23Q9BVJ7 150 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NAGKQ9UJ70 344 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NEIL1Q96FI4 390 aaPredicted RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ZNF785A8K8V0 405 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 CD226Q15762 336 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 TMEM37Q8WXS4 190 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 OR52A4PA6NMU1 304 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 HOXC5Q00444 222 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PJVKQ0ZLH3 352 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 CYS1Q717R9 158 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 DND1Q8IYX4 353 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NEIL2Q969S2 332 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ZNF385BQ569K4 471 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 KCNE4Q8WWG9 221 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 TTC9Q92623 222 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PCYT2Q99447 389 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 MS4A18H0YCH9 400 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 MS4A18Q3C1V0 323 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 C11orf91Q3C1V1 193 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ZNF738Q8NE65 137 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NTMT1Q9BV86 223 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 CPEB1Q9BZB8 566 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 FZD8Q9H461 694 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NUP98P52948 1817 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 LY86O95711 162 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PTHLHP12272 177 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PEX10O60683 326 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ADPRHL1Q8NDY3 354 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ZNF583Q96ND8 569 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SLC17A9Q9BYT1 436 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 AP4M1O00189 453 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 METAP1P53582 386 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 DSC1Q08554 894 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 MAML2Q8IZL2 1156 aaPredicted RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PPP1R1CQ8WVI7 109 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 HGDQ93099 445 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SLCO4A1Q96BD0 722 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 H7C1C5 153 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 LYG2Q86SG7 212 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 RTP4Q96DX8 246 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 NECTIN4Q96NY8 510 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 ADAT1Q9BUB4 502 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SHC1P29353 583 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 OR5M10Q6IEU7 315 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PIGTQ969N2 578 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 C2orf50Q96LR7 162 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 GNB2P62879 340 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 CST6Q15828 149 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 SMN1Q16637 294 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 LSM2Q9Y333 95 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PTRH2Q9Y3E5 179 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 LRP3O75074 770 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 PIGPP57054 158 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 KCNJ10P78508 379 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
NCKAP1-202ENST00000361354 CORTO00230 105 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms