RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 DEFA5Q01523 94 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 ZNF169Q14929 603 aaPredicted RBP21.83■■□□□ 1.08
CPNE1-202ENST00000352393 INPP5JQ15735 1006 aaPredicted RBP21.83■■□□□ 1.08
CPNE1-202ENST00000352393 FAM74A3Q4VXF1 159 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 LANCL3Q6ZV70 420 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 USP34Q70CQ2 3546 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 TMEM185AQ8NFB2 350 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 SLAMF6Q96DU3 332 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 ARPC5LQ9BPX5 153 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 MED29Q9NX70 200 aa21.83■■□□□ 1.08
CPNE1-202ENST00000352393 DBX1A6NMT0 343 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 DUS4LO95620 317 aaKnown RBP21.82■■□□□ 1.08
CPNE1-202ENST00000352393 GSK3AP49840 483 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 UQCC3Q6UW78 93 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 CCDC36Q8IYA8 594 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 CLRN3Q8NCR9 226 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 FOXQ1Q9C009 403 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 CHST11Q9NPF2 352 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 MKL2Q9ULH7 1088 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 SYT7O43581 403 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 ERCC1P07992 297 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-202ENST00000352393 GNB3P16520 340 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 CLDN6P56747 220 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 C14orf28Q4W4Y0 310 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 RTN4RL2Q86UN3 420 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 OR10S1Q8NGN2 331 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 CASTOR1Q8WTX7 329 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 C11orf40Q8WZ69 217 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 NKX6-2Q9C056 277 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-202ENST00000352393 PBOV1Q9GZY1 135 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 SLC5A6Q9Y289 635 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 KCNK7Q9Y2U2 307 aa21.82■■□□□ 1.08
CPNE1-202ENST00000352393 TMEM14DPA8MWL7 114 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 F5H0A9 414 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-202ENST00000352393 VAMP1P23763 118 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 IQCF2Q8IXL9 164 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 INO80EQ8NBZ0 244 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-202ENST00000352393 OR10R2Q8NGX6 335 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 SLC2A4RGQ9NR83 387 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 KLHL13Q9P2N7 655 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 CTSFQ9UBX1 484 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 PCDHB10Q9UN67 800 aa21.81■■□□□ 1.08
CPNE1-202ENST00000352393 CRHP06850 196 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 CD38P28907 300 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 GPR85P60893 370 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 TLE3Q04726 772 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 OGFOD3Q6PK18 319 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 STOML3Q8TAV4 291 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 PMEPA1Q969W9 287 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ZNF416Q9BWM5 594 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 IGHV1OR15-9A0A0B4J2B8 117 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 RHPN2P1A8MT19 583 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ABCD4O14678 606 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ZNF217O75362 1048 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ARL4DP49703 201 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 C1orf189Q5VU69 101 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 KLHL24Q6TFL4 600 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 KCTD9Q7L273 389 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 HOGA1Q86XE5 327 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 OR1S2Q8NGQ3 325 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 OR13C9Q8NGT0 318 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 MARC2Q969Z3 335 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ZC3H10Q96K80 434 aaKnown RBP21.8■■□□□ 1.08
CPNE1-202ENST00000352393 SLC6A15Q9H2J7 730 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 ANAPC10Q9UM13 185 aa21.8■■□□□ 1.08
CPNE1-202ENST00000352393 SPTBN5Q9NRC6 3674 aaKnown RBP21.79■■□□□ 1.08
CPNE1-202ENST00000352393 ADAMTS9Q9P2N4 1935 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 RAB19A4D1S5 217 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 FGF16O43320 207 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 PLATP00750 562 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 AKR1C4P17516 323 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 RAB3AP20336 220 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 DEFB119Q8N690 84 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 OR10H5Q8NGA6 315 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 OR5AP2Q8NGF4 316 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 TPSD1Q9BZJ3 242 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 SELENOIQ9C0D9 397 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 TRBV6-7A0A0A0MS04 114 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 EEF1E1-BLOC1S5C9J1V9 151 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 LMO7DNF2Z398 122 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 F8VVB4 439 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 F8VWA3 439 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 LTBRP36941 435 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 APOBEC1P41238 236 aaKnown RBP21.79■■□□□ 1.08
CPNE1-202ENST00000352393 TAS2R31P59538 309 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 RNF4P78317 190 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 RAB30Q15771 203 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 PABPC1L2AQ5JQF8 200 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 PDSS1Q5T2R2 415 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 AWAT2Q6E213 333 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 C16orf47Q6ZP98 133 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-202ENST00000352393 PIK3IP1Q96FE7 263 aa21.79■■□□□ 1.08
CPNE1-202ENST00000352393 CHMP1AQ9HD42 196 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-202ENST00000352393 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-202ENST00000352393 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-202ENST00000352393 A0A1B0GX78 115 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 C2orf72A6NCS6 295 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 NDUFA2O43678 99 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 IFNA6P05013 189 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms