RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PRSS44E7EML9 344 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 GPRIN2O60269 458 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PDGFBP01127 241 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 CSF1P09603 554 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAB40ALP0C0E4 278 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PATE4P0C8F1 98 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FAM157BP0CG42 384 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FCGR2AP12318 317 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RPA2P15927 270 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ABOP16442 354 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 NME2P22392 152 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 HTR2CP28335 458 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 S100GP29377 79 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FASLGP48023 281 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 CCL11P51671 97 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 LIMK1P53667 647 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MTCP1P56278 107 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 HERV-K104P61576 105 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 HSF1Q00613 529 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FLI1Q01543 452 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 C2orf68Q2NKX9 166 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 EXOSC6Q5RKV6 272 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 DHRS13Q6UX07 377 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 STAC2Q6ZMT1 411 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 WDR88Q6ZMY6 472 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MEX3BQ6ZN04 569 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 SLC16A14Q7RTX9 510 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR4S1Q8NGB4 309 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 NT5CQ8TCD5 201 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 C15orf40Q8WUR7 153 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAB40AQ8WXH6 277 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 HGDQ93099 445 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ARL11Q969Q4 196 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 GIMAP5Q96F15 307 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 TINAGL1Q9GZM7 467 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 INPP5EQ9NRR6 644 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 TAS2R4Q9NYW5 299 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PCDHB10Q9UN67 800 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 COLQQ9Y215 455 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FAM96BQ9Y3D0 163 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MUC6Q6W4X9 2439 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 A0A087WUJ7 227 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 A6NIZ1 184 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 C1orf196B1AJZ1 125 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 FOXS1O43638 330 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MRPL33O75394 65 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 CER1O95813 267 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 TGM6O95932 706 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 NAGAP17050 411 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PPT1P50897 306 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 SLC26A5P58743 744 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAP1BP61224 184 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAP1AP62834 184 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 SNTB1Q13884 538 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PDCD1Q15116 288 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 GAB4Q2WGN9 574 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RNLSQ5VYX0 342 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 VHLLQ6RSH7 139 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 CPEB2Q7Z5Q1 589 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 THOC3Q96J01 351 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ARHGDIGQ99819 225 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 TAS2R8Q9NYW2 309 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OPN4Q9UHM6 478 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR52A1Q9UKL2 312 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 A0A087WV48 116 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MEGF11A6BM72 1044 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 SDCBPO00560 298 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 GDF9O60383 454 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAD51DO75771 328 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RAB6AP20340 208 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 BLVRBP30043 206 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 CARD18P57730 90 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ACTBP60709 375 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RPS27AP62979 156 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 UBA52P62987 128 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ACTG1P63261 375 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 KIF26BQ2KJY2 2108 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 RGS7BPQ6MZT1 257 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 LINC00518Q8N0U6 118 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR1J2Q8NGS2 313 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR5H2Q8NGV7 314 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR10Z1Q8NGY1 313 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 OR10AC1Q8NH08 325 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PPP1R1CQ8WVI7 109 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ROBO4Q8WZ75 1007 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 ALKBH3Q96Q83 286 aaPredicted RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 SLC5A7Q9GZV3 580 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 EIF5A2Q9GZV4 153 aaKnown RBP5.83□□□□□ -1.48
HMG20A-201ENST00000336216 IFT22Q9H7X7 185 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MMP25Q9NPA2 562 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 PLA2G3Q9NZ20 509 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 B9D1Q9UPM9 204 aa5.83□□□□□ -1.48
HMG20A-201ENST00000336216 MPDZO75970 2070 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 MFSD2BA6NFX1 497 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 PHYHO14832 338 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 CXCL13O43927 109 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 NDUFB6O95139 128 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 ERCC1P07992 297 aaPredicted RBP5.82□□□□□ -1.48
HMG20A-201ENST00000336216 VSIG10L2P0DP72 767 aa5.82□□□□□ -1.48
HMG20A-201ENST00000336216 THBS2P35442 1172 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms