RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PPP3R1P63098 170 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 LY6DQ14210 128 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 CTF1Q16619 201 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 PABPC1L2AQ5JQF8 200 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 RTL6Q6ICC9 239 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 MZT2AQ6P582 158 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 VWA1Q6PCB0 445 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 PGAP1Q75T13 922 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 CEACAM19Q7Z692 300 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 BTLAQ7Z6A9 289 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 MED12LQ86YW9 2145 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 SKA3Q8IX90 412 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 ELMOD2Q8IZ81 293 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 GABRG1Q8N1C3 465 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 ZNF433Q8N7K0 673 aaPredicted RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 ZNF610Q8N9Z0 462 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 GALNT11Q8NCW6 608 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 RPS4Y2Q8TD47 263 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 SMAP2Q8WU79 429 aaPredicted RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 TMEM203Q969S6 136 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 APOBEC3DQ96AK3 386 aaPredicted RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 FBXO17Q96EF6 278 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 DOCK7Q96N67 2140 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 TECTBQ96PL2 329 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 PBOV1Q9GZY1 135 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 OR51E2Q9H255 320 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 DCSTAMPQ9H295 470 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 CDH20Q9HBT6 801 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 TXNL4BQ9NX01 149 aaKnown RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 CCDC59Q9P031 241 aaKnown RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 A3GALT2U3KPV4 340 aa8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 PHF3Q92576 2039 aaKnown RBP8.88□□□□□ -0.99
FOXCUT-201ENST00000628509 CACNA1AO00555 2505 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 A0A096LPE4 126 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 TRAV1-2A0A0B4J238 106 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 A0A1W2PPZ6 126 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 OR4C45A6NMZ5 311 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 VSTM5A8MXK1 200 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CCL21O00585 134 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 TBX1O43435 398 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SYNGR3O43761 229 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ZFPL1O95159 310 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CGAP01215 116 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 LCATP04180 440 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ITGA5P08648 1049 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CBR1P16152 277 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ZNF20P17024 532 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 BMP5P22003 454 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 STOMP27105 288 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 S100A5P33763 92 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 GNALP38405 381 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CRYBB2P43320 205 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 PRKXP51817 358 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ZNF121P58317 390 aaPredicted RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 VBP1P61758 197 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 RPS25P62851 125 aaKnown RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 PSG4Q00888 419 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 GABRA6Q16445 453 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CNPY1Q3B7I2 92 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SOWAHCQ53LP3 525 aaPredicted RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ZMAT1Q5H9K5 638 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 WDR38Q5JTN6 314 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 C9orf135Q5VTT2 229 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SLC16A12Q6ZSM3 486 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 LINGO2Q7L985 606 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SERPINA12Q8IW75 414 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ZFP41Q8N8Y5 198 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 OR5D14Q8NGL3 314 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 OR13C3Q8NGS6 347 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 HSD17B8Q92506 261 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 PGLYRP3Q96LB9 341 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 TSC22D3Q99576 134 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SLC17A5Q9NRA2 495 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 FAM206AQ9NX38 181 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 TINAGQ9UJW2 476 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SLC22A13Q9Y226 551 aa8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 SF3B6Q9Y3B4 125 aaKnown RBP8.87□□□□□ -0.99
FOXCUT-201ENST00000628509 CACNA1GO43497 2377 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 LOC390937A0A1W2PQ73 354 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 OR5H1A6NKK0 313 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 A8MXE2 369 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 C16orf97H3BN30 126 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 LYZL6O75951 148 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 ATE1O95260 518 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 LALBAP00709 142 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 ADRA2AP08913 450 aa8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 MMP7P09237 267 aaPredicted RBP8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 CALRP27797 417 aaKnown RBP8.86□□□□□ -0.99
FOXCUT-201ENST00000628509 DDOSTP39656 456 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms