RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CCL1P22362 96 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 PRKXP51817 358 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 CLDN15P56746 228 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 SNTB2Q13425 540 aaKnown RBP19.46■□□□□ 0.71
PNKP-220ENST00000627232 TBRG1Q3YBR2 411 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 DTX1Q86Y01 620 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 SULF2Q8IWU5 870 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 ZBTB8BQ8NAP8 495 aaPredicted RBP19.46■□□□□ 0.71
PNKP-220ENST00000627232 OR8B12Q8NGG6 310 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 OR51A2Q8NGJ7 313 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 OR1J2Q8NGS2 313 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 RBM24Q9BX46 236 aaKnown RBP19.46■□□□□ 0.71
PNKP-220ENST00000627232 MYO15AQ9UKN7 3530 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 GGT3PA6NGU5 568 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 CYTIPO60759 359 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 TMIGD3P0DMS9 266 aaPredicted RBP19.46■□□□□ 0.71
PNKP-220ENST00000627232 BDKRB2P30411 391 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 SPOCK1Q08629 439 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 PLA2G7Q13093 441 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 GLYATL3Q5SZD4 288 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 ATAD3CQ5T2N8 411 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 FAM27BQ5VT28 67 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 ZNF529Q6P280 563 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 ZNF283Q8N7M2 679 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 OR1M1Q8NGA1 313 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 OR5D14Q8NGL3 314 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 DEDD2Q8WXF8 326 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 SLC39A7Q92504 469 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 PTX4Q96A99 478 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 SORCS2Q96PQ0 1159 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 ZNF318Q5VUA4 2279 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 CDRT15L2A8MXV6 281 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 LDLRAD4O15165 306 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 DHFRP00374 187 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 TCRBP04435 133 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 GABRA1P14867 456 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 ARSBP15848 533 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 EFNB2P52799 333 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 RAG2P55895 527 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 ZNF813Q6ZN06 617 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 AAED1Q7RTV5 226 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 OR51E1Q8TCB6 317 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 CPT1CQ8TCG5 803 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 ROBO4Q8WZ75 1007 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 CACNG6Q9BXT2 260 aa19.45■□□□□ 0.7
PNKP-220ENST00000627232 KLF13Q9Y2Y9 288 aaPredicted RBP19.45■□□□□ 0.7
PNKP-220ENST00000627232 VPS13AQ96RL7 3174 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 CIB4A0PJX0 185 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 ANKRD20A5PA0PJZ0 165 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 DCDC2BA2VCK2 349 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 PRR33A8MZF0 331 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 APOC1P02654 83 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 OLFML2AQ68BL7 652 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 MTFR2Q6P444 385 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 LINC00696Q6ZRV3 163 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 DOK3Q7L591 496 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 ADGRE4PQ86SQ3 457 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 MDS2Q8NDY4 140 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 TMEM45BQ96B21 275 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 PHF21AQ96BD5 680 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 ADAT3Q96EY9 351 aaPredicted RBP19.44■□□□□ 0.7
PNKP-220ENST00000627232 TTTY12Q9BZ98 90 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 MOV10Q9HCE1 1003 aaKnown RBP19.44■□□□□ 0.7
PNKP-220ENST00000627232 TMEM138Q9NPI0 162 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 PLA2G3Q9NZ20 509 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 CGGBP1Q9UFW8 167 aaPredicted RBP19.44■□□□□ 0.7
PNKP-220ENST00000627232 RHBDD3Q9Y3P4 386 aa19.44■□□□□ 0.7
PNKP-220ENST00000627232 NCOA6Q14686 2063 aaPredicted RBP19.43■□□□□ 0.7
PNKP-220ENST00000627232 A0A0A6YYH2 397 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 A6NJ64 397 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 ERCC1P07992 297 aaPredicted RBP19.43■□□□□ 0.7
PNKP-220ENST00000627232 ZNF20P17024 532 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 RAB3AP20336 220 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 GIFP27352 417 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 GNALP38405 381 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 SOX8P57073 446 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 HYAL4Q2M3T9 481 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 CCDC92Q53HC0 331 aaPredicted RBP19.43■□□□□ 0.7
PNKP-220ENST00000627232 ELFN2Q5R3F8 820 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 RIPPLY2Q5TAB7 128 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 PGAP1Q75T13 922 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 BTN2A1Q7KYR7 527 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 CDH24Q86UP0 819 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 GPR137CQ8N3F9 429 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 GALNT16Q8N428 558 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 JAGN1Q8N5M9 183 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 GCDHQ92947 438 aaPredicted RBP19.43■□□□□ 0.7
PNKP-220ENST00000627232 UQCC2Q9BRT2 126 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 HRASLSQ9HDD0 168 aa19.43■□□□□ 0.7
PNKP-220ENST00000627232 KNTC1P50748 2209 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 NME2P1O60361 137 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 MT-ND4P03905 459 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 SP1P08047 785 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 CST2P09228 141 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 RAB6AP20340 208 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 NME2P22392 152 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 OTX1P32242 354 aaPredicted RBP19.42■□□□□ 0.7
PNKP-220ENST00000627232 LHX2P50458 406 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 SLC25A25Q6KCM7 469 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 FAM57BQ71RH2 274 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms