RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 WACQ9BTA9 647 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 EGLN1Q9GZT9 426 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 NUAK2Q9H093 628 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 ELOVL3Q9HB03 270 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 CGGBP1Q9UFW8 167 aaPredicted RBP12.82□□□□□ -0.36
TGFB1-202ENST00000597453 NDRG4Q9ULP0 352 aaKnown RBP12.82□□□□□ -0.36
TGFB1-202ENST00000597453 BAIAP2Q9UQB8 552 aa12.82□□□□□ -0.36
TGFB1-202ENST00000597453 IGLV1-36A0A0B4J1U3 117 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ISPDA4D126 451 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-202ENST00000597453 DOK2O60496 412 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ABHD16AO95870 558 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 FCGR1AP12314 374 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 LIPAP38571 399 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 HTR5AP47898 357 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ATP6AP1Q15904 470 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 SLC35F1Q5T1Q4 408 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 VASH1Q7L8A9 365 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-202ENST00000597453 C1QL2Q7Z5L3 287 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 HS3ST5Q8IZT8 346 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 LNX2Q8N448 690 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 NPEPL1Q8NDH3 523 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 SDR9C7Q8NEX9 313 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 OR2T33Q8NG76 320 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 OR52E2Q8NGJ4 325 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ZFAND2BQ8WV99 257 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 SLC7A6Q92536 515 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 TSSK6Q9BXA6 273 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ZNF556Q9HAH1 456 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 UBAP1Q9NZ09 502 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 ZDHHC8Q9ULC8 765 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 COA3Q9Y2R0 106 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-202ENST00000597453 AP4S1Q9Y587 144 aa12.81□□□□□ -0.36
TGFB1-202ENST00000597453 SGCEO43556 437 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 COX5BP10606 129 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ANXA8P13928 327 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 FASP25445 335 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 HILS1P60008 231 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ACTR3P61158 418 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
TGFB1-202ENST00000597453 LCN2P80188 198 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 TNFAIP6P98066 277 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-202ENST00000597453 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.8□□□□□ -0.36
TGFB1-202ENST00000597453 SCRN3Q0VDG4 424 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 SCGB2A2Q13296 93 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ZMAT1Q5H9K5 638 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 DCAF12L2Q5VW00 463 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ARL9Q6T311 187 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 C12orf54Q6X4T0 127 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 Q6ZR03 302 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ZBTB46Q86UZ6 589 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 OR4Q3Q8NH05 313 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 TEX47Q8TBZ9 253 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 DNAJC9Q8WXX5 260 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 TSSK2Q96PF2 358 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 RERGLQ9H628 205 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 RPRD1BQ9NQG5 326 aaKnown RBP12.8□□□□□ -0.36
TGFB1-202ENST00000597453 TBCCD1Q9NVR7 557 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 ASH2LQ9UBL3 628 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 PURGQ9UJV8 347 aaKnown RBP12.8□□□□□ -0.36
TGFB1-202ENST00000597453 PCDHB10Q9UN67 800 aa12.8□□□□□ -0.36
TGFB1-202ENST00000597453 OR6C68A6NDL8 312 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 H3BN98 237 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 J3QLI3 93 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 DCTN6O00399 190 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 IGHV2-70P01814 119 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 PRKACGP22612 351 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
TGFB1-202ENST00000597453 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 AQP6Q13520 282 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 KCNMB1Q16558 191 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 ZNF362Q5T0B9 420 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-202ENST00000597453 TEX29Q8N6K0 151 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 ATG16L2Q8NAA4 619 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 RAB3IPQ96QF0 476 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-202ENST00000597453 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
TGFB1-202ENST00000597453 DDOQ99489 341 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 SLC6A7Q99884 636 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 B9D1Q9UPM9 204 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 STARD10Q9Y365 291 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 NPTNQ9Y639 398 aa12.79□□□□□ -0.36
TGFB1-202ENST00000597453 OR6C6A6NF89 314 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 GPANK1O95872 356 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 FSHBP01225 129 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 OSMP13725 252 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 KITLGP21583 273 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 CFPP27918 469 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 GRK5P34947 590 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 ACTG1P63261 375 aa12.78□□□□□ -0.36
TGFB1-202ENST00000597453 KPNB1Q14974 876 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms