RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 EDDM13A0A1B0GTR0 161 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 RAB27BO00194 218 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 PMELP40967 661 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 SULT1A1P50225 295 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 CCR4P51679 360 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 RPL18Q07020 188 aaKnown RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 OR2A2Q6IF42 318 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 LRRC3BQ96PB8 259 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 OR8B4Q96RC9 309 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 CDC6Q99741 560 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 SMIM3Q9BZL3 60 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 POLE3Q9NRF9 147 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 COL4A6Q14031 1691 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 SOX1O00570 391 aaPredicted RBP12.9□□□□□ -0.34
SMG6-215ENST00000574501 CD63P08962 238 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 SPARCP09486 303 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 ADH5P11766 374 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 ITGA3P26006 1051 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 DNASE1L1P49184 302 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 TDGQ13569 410 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 ZNF124Q15973 351 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
SMG6-215ENST00000574501 CLEC18BQ6UXF7 455 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 PMM1Q92871 262 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 RELTQ969Z4 430 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 CYYR1Q96J86 154 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 MEGF10Q96KG7 1140 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 OR2A5Q96R48 311 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 EIF5A2Q9GZV4 153 aaKnown RBP12.9□□□□□ -0.34
SMG6-215ENST00000574501 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 PARP11Q9NR21 331 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 KIF26BQ2KJY2 2108 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 CXorf65A6NEN9 183 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 NME2P1O60361 137 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 OR10H2O60403 315 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
SMG6-215ENST00000574501 RENP00797 406 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 IGFBP3P17936 291 aaPredicted RBP12.9□□□□□ -0.34
SMG6-215ENST00000574501 EEF1A1P5Q5VTE0 462 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 TMEM184AQ6ZMB5 413 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 SSX9Q7RTT3 188 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 ARRDC1Q8N5I2 433 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 SEMA6DQ8NFY4 1073 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 OR13C3Q8NGS6 347 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 CD300LFQ8TDQ1 290 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 RSPRY1Q96DX4 576 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 SPACA7Q96KW9 195 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
SMG6-215ENST00000574501 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 K7EQS6 105 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 GMFGO60234 142 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 LILRB3O75022 631 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 FGF19O95750 216 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 EML2O95834 649 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 TSPAN15O95858 294 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 PHF19Q5T6S3 580 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 ZNF679Q8IYX0 411 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 CTHRC1Q96CG8 243 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 C2orf74A8MZ97 194 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 C11orf98E9PRG8 122 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 CYR61O00622 381 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 TIMP1P01033 207 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 IFNA17P01571 189 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 HOXC4P09017 264 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 HOXB5P09067 269 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 MPZP25189 248 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 NDUFA6P56556 154 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 MIDNQ504T8 468 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 NSUN5P2Q63ZY6 315 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 HOGA1Q86XE5 327 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 ZNF296Q8WUU4 475 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 KTI12Q96EK9 354 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 CNTD2Q9H8S5 307 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 MMP25Q9NPA2 562 aa12.89□□□□□ -0.35
SMG6-215ENST00000574501 ATXN7L1Q9ULK2 861 aaPredicted RBP12.89□□□□□ -0.35
SMG6-215ENST00000574501 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 A0A0A6YYH2 397 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 URADA6NGE7 173 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 A6NJ64 397 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms