RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 POLEQ07864 2286 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 E9PLN8 166 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 TOXO94900 526 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 CGAP01215 116 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 RAF1P04049 648 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ANXA2P07355 339 aaKnown RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 ITGA5P08648 1049 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 MMP7P09237 267 aaPredicted RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 OCM2P0CE71 109 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ZNF12P17014 697 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ACHEP22303 614 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PAX7P23759 505 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 OTX1P32242 354 aaPredicted RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 HTR5AP47898 357 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 SLC6A9P48067 706 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 RORCP51449 518 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ZNF121P58317 390 aaPredicted RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 RAB1AP62820 205 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 Q499Y3 187 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 SOWAHCQ53LP3 525 aaPredicted RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 ZMAT1Q5H9K5 638 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PABPC1L2AQ5JQF8 200 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 C1QTNF12Q5T7M4 302 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ZNF774Q6NX45 483 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 TMEM91Q6ZNR0 172 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 CROCCP3Q8IVE0 287 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 ELMOD2Q8IZ81 293 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PRSS35Q8N3Z0 413 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 IL17RDQ8NFM7 739 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 OR52H1Q8NGJ2 320 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 AKR7LQ8NHP1 331 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 DYNC2LI1Q8TCX1 351 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 HSD17B8Q92506 261 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PGAM5Q96HS1 289 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 BOD1Q96IK1 185 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 VKORC1Q9BQB6 163 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 PBOV1Q9GZY1 135 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 WNT5BQ9H1J7 359 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 MOV10Q9HCE1 1003 aaKnown RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 NUFIP1Q9UHK0 495 aaKnown RBP9.01□□□□□ -0.97
USP3-219ENST00000561326 SLC22A13Q9Y226 551 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
USP3-219ENST00000561326 CACNA1BQ00975 2339 aa9□□□□□ -0.97
USP3-219ENST00000561326 TRAV1-2A0A0B4J238 106 aa9□□□□□ -0.97
USP3-219ENST00000561326 TRGV8A0A0C4DH27 118 aa9□□□□□ -0.97
USP3-219ENST00000561326 A0A1B0GVI7 797 aa9□□□□□ -0.97
USP3-219ENST00000561326 M0R135 149 aa9□□□□□ -0.97
USP3-219ENST00000561326 DVL2O14641 736 aa9□□□□□ -0.97
USP3-219ENST00000561326 PDCD5O14737 125 aa9□□□□□ -0.97
USP3-219ENST00000561326 MSTNO14793 375 aa9□□□□□ -0.97
USP3-219ENST00000561326 CASKO14936 926 aa9□□□□□ -0.97
USP3-219ENST00000561326 SC5DO75845 299 aa9□□□□□ -0.97
USP3-219ENST00000561326 LYZL6O75951 148 aa9□□□□□ -0.97
USP3-219ENST00000561326 CDRT1O95170 752 aa9□□□□□ -0.97
USP3-219ENST00000561326 WNT11O96014 354 aa9□□□□□ -0.97
USP3-219ENST00000561326 HLA-HP01893 362 aa9□□□□□ -0.97
USP3-219ENST00000561326 PATE4P0C8F1 98 aa9□□□□□ -0.97
USP3-219ENST00000561326 COX5AP20674 150 aa9□□□□□ -0.97
USP3-219ENST00000561326 CALRP27797 417 aaKnown RBP9□□□□□ -0.97
USP3-219ENST00000561326 SDC2P34741 201 aa9□□□□□ -0.97
USP3-219ENST00000561326 KIR3DL2P43630 455 aa9□□□□□ -0.97
USP3-219ENST00000561326 MTNR1BP49286 362 aa9□□□□□ -0.97
USP3-219ENST00000561326 PSMD7P51665 324 aa9□□□□□ -0.97
USP3-219ENST00000561326 FOXG1P55316 489 aaPredicted RBP9□□□□□ -0.97
USP3-219ENST00000561326 MFGE8Q08431 387 aaPredicted RBP9□□□□□ -0.97
USP3-219ENST00000561326 GABRA6Q16445 453 aa9□□□□□ -0.97
USP3-219ENST00000561326 GSG1Q2KHT4 349 aa9□□□□□ -0.97
USP3-219ENST00000561326 ODF4Q2M2E3 257 aa9□□□□□ -0.97
USP3-219ENST00000561326 TBRG1Q3YBR2 411 aa9□□□□□ -0.97
USP3-219ENST00000561326 SFRP5Q5T4F7 317 aa9□□□□□ -0.97
USP3-219ENST00000561326 FAM57BQ71RH2 274 aa9□□□□□ -0.97
USP3-219ENST00000561326 GABRG1Q8N1C3 465 aa9□□□□□ -0.97
USP3-219ENST00000561326 C17orf78Q8N4C9 275 aa9□□□□□ -0.97
USP3-219ENST00000561326 CCDC54Q8NEL0 328 aa9□□□□□ -0.97
USP3-219ENST00000561326 OR1J2Q8NGS2 313 aa9□□□□□ -0.97
USP3-219ENST00000561326 TSEN15Q8WW01 171 aaKnown RBP9□□□□□ -0.97
USP3-219ENST00000561326 RND1Q92730 232 aa9□□□□□ -0.97
USP3-219ENST00000561326 ZNF799Q96GE5 643 aa9□□□□□ -0.97
USP3-219ENST00000561326 OR14A2Q96R54 314 aa9□□□□□ -0.97
USP3-219ENST00000561326 DCLRE1CQ96SD1 692 aaKnown RBP9□□□□□ -0.97
USP3-219ENST00000561326 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
USP3-219ENST00000561326 OPN3Q9H1Y3 402 aaPredicted RBP9□□□□□ -0.97
USP3-219ENST00000561326 OR10A2Q9H208 303 aa9□□□□□ -0.97
USP3-219ENST00000561326 TPK1Q9H3S4 243 aa9□□□□□ -0.97
USP3-219ENST00000561326 RNF167Q9H6Y7 350 aa9□□□□□ -0.97
USP3-219ENST00000561326 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
USP3-219ENST00000561326 OBP2BQ9NPH6 170 aa9□□□□□ -0.97
USP3-219ENST00000561326 G6PC2Q9NQR9 355 aa9□□□□□ -0.97
USP3-219ENST00000561326 SNTG1Q9NSN8 517 aa9□□□□□ -0.97
USP3-219ENST00000561326 FAM206AQ9NX38 181 aa9□□□□□ -0.97
USP3-219ENST00000561326 CKLFQ9UBR5 152 aa9□□□□□ -0.97
USP3-219ENST00000561326 TINAGQ9UJW2 476 aa9□□□□□ -0.97
USP3-219ENST00000561326 DHDHQ9UQ10 334 aa9□□□□□ -0.97
USP3-219ENST00000561326 N6AMT1Q9Y5N5 214 aa9□□□□□ -0.97
USP3-219ENST00000561326 ATRXP46100 2492 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 ITPR1Q14643 2758 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 DIDO1Q9BTC0 2240 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms