RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 POU3F2P20265 443 aaPredicted RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 PRKACBP22694 351 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 EIF1AXP47813 144 aaKnown RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 ZNF41P51814 821 aaPredicted RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 NXPH1P58417 271 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 DHRS2Q13268 280 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 SQSTM1Q13501 440 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 PCK2Q16822 640 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ATPAF1Q5TC12 328 aaPredicted RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 PRAMEF17Q5VTA0 474 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 LANCL3Q6ZV70 420 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 HSD17B13Q7Z5P4 300 aaPredicted RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 GLRX5Q86SX6 157 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 TRAPPC6BQ86SZ2 158 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 KDM8Q8N371 416 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ACBD4Q8NC06 268 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 CHST4Q8NCG5 386 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 PLPP5Q8NEB5 264 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 OR5D14Q8NGL3 314 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 OR5M9Q8NGP3 310 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 OR5M8Q8NGP6 311 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 OR1J2Q8NGS2 313 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 RNF133Q8WVZ7 376 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ZBTB8AQ96BR9 441 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 FGGYQ96C11 551 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 LINC00052Q96N35 136 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 UQCC2Q9BRT2 126 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 REG4Q9BYZ8 158 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 SLC25A32Q9H2D1 315 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ZMAT3Q9HA38 289 aaKnown RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 G6PC2Q9NQR9 355 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 FGF21Q9NSA1 209 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ALKBH4Q9NXW9 302 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 MYEF2Q9P2K5 600 aaKnown RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 CTSFQ9UBX1 484 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 SUSD2Q9UGT4 822 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 GDF2Q9UK05 429 aaPredicted RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 KLK13Q9UKR3 277 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 POLR1DQ9Y2S0 133 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 DNAH14Q0VDD8 3507 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CPED1A4D0V7 1026 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR5H14A6NHG9 310 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 A8MXK9 166 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MS4A18H0YCH9 400 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TSPAN4O14817 238 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PIAS2O75928 621 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR2F2O95006 317 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 WISP1O95388 367 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 IFNA6P05013 189 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 GIMD1P0DJR0 217 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 GLB1P16278 677 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF20P17024 532 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TBPP20226 339 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 RAB3AP20336 220 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 HSD11B1P28845 292 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MPGP29372 298 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 STARP49675 285 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 EFNA3P52797 238 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FBXW4P57775 412 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CXADRP78310 365 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR2F1Q13607 317 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF345Q14585 488 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 NKPD1Q17RQ9 610 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MS4A18Q3C1V0 323 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF660Q6AZW8 331 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR10K2Q6IF99 312 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SHISA6Q6ZSJ9 500 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 LYG2Q86SG7 212 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FJX1Q86VR8 437 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZDHHC22Q8N966 263 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR1M1Q8NGA1 313 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR4D6Q8NGJ1 314 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 AQP3Q92482 292 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PMEPA1Q969W9 287 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SLAMF6Q96DU3 332 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PHB2Q99623 299 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 EDEM2Q9BV94 578 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PRO3102Q9H379 93 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MOB1AQ9H8S9 216 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZC4H2Q9NQZ6 224 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SLC2A8Q9NY64 477 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 COQ3Q9NZJ6 369 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 KLRF1Q9NZS2 232 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FBXL2Q9UKC9 423 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 VDAC3Q9Y277 283 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 B3GALT5Q9Y2C3 310 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 KCNMB2Q9Y691 235 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ASXL3Q9C0F0 2248 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FER1L5A0AVI2 2057 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 A0A1B0GTI1 187 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 D6RAR5 112 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ALOX12BO75342 701 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 HEXBP07686 556 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 HOXD4P09016 255 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 FGF2P09038 288 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF735P0CB33 412 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SLC25A4P12235 298 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms