RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 KDF1Q8NAX2 398 aaPredicted RBP12.57□□□□□ -0.4
LIG1-203ENST00000536218 SEMA6DQ8NFY4 1073 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 C2orf88Q9BSF0 95 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 ATG5Q9H1Y0 275 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 PARPBPQ9NWS1 579 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 UPB1Q9UBR1 384 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 DNAJB11Q9UBS4 358 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 CSAG2Q9Y5P2 127 aa12.57□□□□□ -0.4
LIG1-203ENST00000536218 DCTN6O00399 190 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 BRINP1O60477 761 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 IGKV1D-16P01601 117 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 MAKP20794 623 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 OR1D4P47884 311 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 EMDP50402 254 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 RAB4BP61018 213 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 LTBQ06643 244 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 PTCRAQ6ISU1 281 aaPredicted RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 FAM219AQ8IW50 185 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 TMEM239Q8WW34 195 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 CTHRC1Q96CG8 243 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 CMTM3Q96MX0 182 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 DGAT2Q96PD7 388 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 PRSS27Q9BQR3 290 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 INPP5EQ9NRR6 644 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 TMEM100Q9NV29 134 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 ZNF726A6NNF4 738 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 MAS1P04201 325 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 BCKDHBP21953 392 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 VAMP1P23763 118 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 BIKQ13323 160 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 GATSQ8NAP1 163 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 TCTN2Q96GX1 697 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 ZNF559Q9BR84 538 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 MRPL37Q9BZE1 423 aaKnown RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 TAS2R8Q9NYW2 309 aa12.56□□□□□ -0.4
LIG1-203ENST00000536218 MRPS33Q9Y291 106 aaKnown RBP12.56□□□□□ -0.4
LIG1-203ENST00000536218 A0A087WV48 116 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 UNC119BA6NIH7 251 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 SRPX2O60687 465 aaPredicted RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 RAB3DO95716 219 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 THBS1P07996 1170 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RAB6AP20340 208 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 OR1D5P58170 312 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RCBTB1Q8NDN9 531 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 STACQ99469 402 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 NKX3-1Q99801 234 aaPredicted RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 DOK5Q9P104 306 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 STEAP1Q9UHE8 339 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 MMP24Q9Y5R2 645 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 TRAV27A0A087WT01 109 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 CYTIPO60759 359 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 CTNSO60931 367 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 FAM157CP0CG43 387 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 S1PR1P21453 382 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 GRPRP30550 384 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 LPAR6P43657 344 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 FASLGP48023 281 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 NKPD1Q17RQ9 610 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 OR13C2Q8NGS9 318 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 LMF1Q96S06 567 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 CD180Q99467 661 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 SPOCK3Q9BQ16 436 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 KCNK15Q9H427 330 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 SIDT1Q9NXL6 827 aaKnown RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 PHOX2AO14813 284 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 LRP3O75074 770 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RPP14O95059 124 aaKnown RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 ARL4DP49703 201 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 ACY1Q03154 408 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 PLAURQ03405 335 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 FAM53BQ14153 422 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 MEF2DQ14814 521 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 GFI1BQ5VTD9 330 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 C15orf40Q8WUR7 153 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RAB33BQ9H082 229 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 SPACA1Q9HBV2 294 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 PNO1Q9NRX1 252 aaKnown RBP12.55□□□□□ -0.4
LIG1-203ENST00000536218 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
LIG1-203ENST00000536218 RP1P56715 2156 aa12.54□□□□□ -0.4
LIG1-203ENST00000536218 GMFGO60234 142 aa12.54□□□□□ -0.4
LIG1-203ENST00000536218 NKX2-2O95096 273 aa12.54□□□□□ -0.4
LIG1-203ENST00000536218 F10P00742 488 aa12.54□□□□□ -0.4
LIG1-203ENST00000536218 CD14P08571 375 aa12.54□□□□□ -0.4
LIG1-203ENST00000536218 ZNF84P51523 738 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms