RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 FGF20Q9NP95 211 aaPredicted RBP2.29□□□□□ -2.04
PCM1-220ENST00000523896 ISYNA1Q9NPH2 558 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 NMRK1Q9NWW6 199 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 WDR87Q6ZQQ6 2873 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 DMXL1Q9Y485 3027 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 COL4A4P53420 1690 aaPredicted RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 COL4A6Q14031 1691 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 PIEZO2Q9H5I5 2752 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 ANKARQ7Z5J8 1434 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 SMG6Q86US8 1419 aaKnown RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 IGHV3-74A0A0B4J1X5 117 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CCDC169A6NNP5 214 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 RAB29O14966 203 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 MED6O75586 246 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CLIC3O95833 236 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 RETP07949 1114 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 GNAO1P09471 354 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CCL5P13501 91 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 FOXN2P32314 431 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 PRMT2P55345 433 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 LINC00315P59091 139 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 ECH1Q13011 328 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 SLAQ13239 276 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 FAM83EQ2M2I3 478 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CCDC183Q5T5S1 534 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 ANKRD22Q5VYY1 191 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 OAFQ86UD1 273 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 H1FOOQ8IZA3 346 aaPredicted RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 RNF139Q8WU17 664 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 KIFAP3Q92845 792 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CREB3L1Q96BA8 519 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 ZNF578Q96N58 590 aaPredicted RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 OR2A5Q96R48 311 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 CENPKQ9BS16 269 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 PARP12Q9H0J9 701 aaKnown RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 PSG8Q9UQ74 426 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 RRP15Q9Y3B9 282 aaKnown RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 GOLT1BQ9Y3E0 138 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 MRPS18BQ9Y676 258 aaKnown RBP2.28□□□□□ -2.04
PCM1-220ENST00000523896 ASPMQ8IZT6 3477 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 MYO9AB2RTY4 2548 aa2.28□□□□□ -2.04
PCM1-220ENST00000523896 LRRC37A2A6NM11 1700 aa2.28□□□□□ -2.05
PCM1-220ENST00000523896 PIKFYVEQ9Y2I7 2098 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 HECTD1Q9ULT8 2610 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 CEP162Q5TB80 1403 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 EIF3AQ14152 1382 aaKnown RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 MROH7-TTC4A0A0A0MT08 1334 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 GLYATL1P3A0A0U1RQE8 302 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ZNF816-ZNF321PA0A0X1KG74 233 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 A0A1B0GVX0 72 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 AP3B1O00203 1094 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 DPM1O60762 260 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 WBP4O75554 376 aaKnown RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 FABP3P05413 133 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 PRPS2P11908 318 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 TMED10P49755 219 aaKnown RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 CDH6P55285 790 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ADARB1P78563 741 aaKnown RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 TWF1Q12792 350 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 TCP10Q12799 353 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ERCC8Q13216 396 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 EIF4EBP1Q13541 118 aaPredicted RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 CCNJQ5T5M9 372 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ARMC12Q5T9G4 340 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 RAET1LQ5VY80 246 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 FAM71E1Q6IPT2 247 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 SLC8B1Q6J4K2 584 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 NOXO1Q8NFA2 376 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ELMO1Q92556 727 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 DCPSQ96C86 337 aaKnown RBP2.27□□□□□ -2.05
PCM1-220ENST00000523896 SERPINB12Q96P63 405 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 NECAP2Q9NVZ3 263 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 BCORQ6W2J9 1755 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 CFAP46Q8IYW2 2715 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 ANKRD26Q9UPS8 1709 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 MYO10Q9HD67 2058 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 GVINP1Q7Z2Y8 2422 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 SPEGQ15772 3267 aa2.27□□□□□ -2.05
PCM1-220ENST00000523896 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 KIF1BO60333 1816 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 AFDNP55196 1824 aaKnown RBP2.26□□□□□ -2.05
PCM1-220ENST00000523896 KALRNO60229 2985 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 KDM3BQ7LBC6 1761 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 POLR3AO14802 1390 aaPredicted RBP2.26□□□□□ -2.05
PCM1-220ENST00000523896 MAPK8IP3Q9UPT6 1336 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 FBN3Q75N90 2809 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 LRRIQ3A6PVS8 624 aaPredicted RBP2.26□□□□□ -2.05
PCM1-220ENST00000523896 CLOCKO15516 846 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 RNF13O43567 381 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 SRP72O76094 671 aaKnown RBP2.26□□□□□ -2.05
PCM1-220ENST00000523896 ZNF24P17028 368 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 MAS1LP35410 378 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 CDKN2BP42772 138 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 NAMPTP43490 491 aa2.26□□□□□ -2.05
PCM1-220ENST00000523896 ZNF138P52744 262 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms