RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 OCMP0CE72 109 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GABRB1P18505 474 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ALOX5APP20292 161 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TNFSF4P23510 183 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DNASE1P24855 282 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GLRXP35754 106 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SERPINF1P36955 418 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GNALP38405 381 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 KLF3P57682 345 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HIST1H3AP68431 136 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DBPQ10586 325 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ST3GAL4Q11206 333 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GALEQ14376 348 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PCK2Q16822 640 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF672Q499Z4 452 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZMAT1Q5H9K5 638 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HIST2H3PS2Q5TEC6 136 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF787Q6DD87 383 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 C20orf204Q6ZNR8 217 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 USP51Q70EK9 711 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HIST2H3AQ71DI3 136 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FAM57BQ71RH2 274 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PGAP1Q75T13 922 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LHFPL3Q86UP9 236 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EGFL6Q8IUX8 553 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FTMTQ8N4E7 242 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SVOPQ8N4V2 548 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CPEB3Q8NE35 698 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NUP37Q8NFH4 326 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 KBTBD8Q8NFY9 601 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 OR52I1Q8NGK6 324 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ST7LQ8TDW4 575 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SMAP2Q8WU79 429 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RNF133Q8WVZ7 376 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SPRYD4Q8WW59 207 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GGHQ92820 318 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MAP6Q96JE9 813 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HIST1H2AAQ96QV6 131 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 OR8B4Q96RC9 309 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DOK1Q99704 481 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ALG8Q9BVK2 526 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 COMMD4Q9H0A8 199 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 OPA3Q9H6K4 179 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MOB1AQ9H8S9 216 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NEK6Q9HC98 313 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FGF20Q9NP95 211 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CA10Q9NS85 328 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PLCXD1Q9NUJ7 323 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DDX28Q9NUL7 540 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TBCCD1Q9NVR7 557 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SLCO1C1Q9NYB5 712 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NKIRAS2Q9NYR9 191 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PTTG3PQ9NZH4 202 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EXOGQ9Y2C4 368 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MYRFQ9Y2G1 1151 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NOP16Q9Y3C1 178 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LRP12Q9Y561 859 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NCOA6Q14686 2063 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 INTS1Q8N201 2190 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LRRK2Q5S007 2527 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DOPEY1Q5JWR5 2465 aa4.71□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HELZ2Q9BYK8 2649 aaKnown RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 HIVEP3Q5T1R4 2406 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 A0A1B0GVI7 797 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ZNF503-AS2A6NEH8 195 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ANKRD30BLA7E2S9 258 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 B9A039 149 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 H3BSA7 217 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 XPNPEP2O43895 674 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 WBP4O75554 376 aaKnown RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 CTAG2O75638 210 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 DBHP09172 617 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 OR4A8P0C604 315 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ACSM4P0C7M7 580 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 SLC2A1P11166 492 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 PIPP12273 146 aaPredicted RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ZNF35P13682 527 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ZNF12P17014 697 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 CALCRP30988 508 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 DCTDP32321 178 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 THBS4P35443 961 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 LIPAP38571 399 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 OPRL1P41146 370 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ZNF121P58317 390 aaPredicted RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 TAS2R43P59537 309 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 PSMA6P60900 246 aaKnown RBP4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 ROM1Q03395 351 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 SPOCK1Q08629 439 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 MZT1Q08AG7 82 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 TP53I3Q53FA7 332 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 SPATA46Q5T0L3 261 aa4.71□□□□□ -1.66
SCARNA16.4-201ENST00000516956 C22orf34Q6ZV56 151 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms