RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 THTPAQ9BU02 230 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 TSSK6Q9BXA6 273 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 MUC13Q9H3R2 512 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 MAGIXQ9H6Y5 334 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ARMC1Q9NVT9 282 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ARHGAP32A7KAX9 2087 aa12.52□□□□□ -0.4
UBE2D3-228ENST00000508974 PLPP2O43688 288 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 DEAF1O75398 565 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 RGS9O75916 674 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 IGHV2-5P01817 119 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 GYPBP06028 91 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 SBK2P0C263 348 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF823P16415 610 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 PCMT1P22061 227 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 GGT2P36268 569 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 MICAQ29983 383 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 RSPO1Q2MKA7 263 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2T5Q6IEZ7 315 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 RPL13AP3Q6NVV1 102 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 RASSF6Q6ZTQ3 369 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 PEG10Q86TG7 708 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 NAA40Q86UY6 237 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC37A3Q8NCC5 494 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 OR5L1Q8NGL2 311 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2T29Q8NH02 315 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 ASB9Q96DX5 294 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2V2Q96R30 315 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 ATF6BQ99941 703 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 METTL17Q9H7H0 456 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 ATPIF1Q9UII2 106 aa12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 PRPF19Q9UMS4 504 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-228ENST00000508974 TRAV20A0A0B4J274 112 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 H0YL77 283 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 ACSM4P0C7M7 580 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 PSKH1P11801 424 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 RAC2P15153 192 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 TUBG1P23258 451 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 LCN2P80188 198 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 CRMP1Q14194 572 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 FBXW12Q6X9E4 464 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 OR10G2Q8NGC3 310 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 OR4Q3Q8NH05 313 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 MAP6Q96JE9 813 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 TUBG2Q9NRH3 451 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 IL20Q9NYY1 176 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 PPP1R3CQ9UQK1 317 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
UBE2D3-228ENST00000508974 LOC105371242A0A075B767 164 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 PNPP00491 289 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 CST1P01037 141 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 LCATP04180 440 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 SPARCP09486 303 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 RAP2AP10114 183 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 CLUP10909 449 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 ANPEPP15144 967 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 TNFRSF1AP19438 455 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC6A9P48067 706 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 IQCF1Q8N6M8 205 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 OR8G5Q8NG78 346 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 OR10S1Q8NGN2 331 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2T4Q8NH00 348 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF420Q8TAQ5 688 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 OTULINQ96BN8 352 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF582Q96NG8 517 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 PNRC2Q9NPJ4 139 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 IL19Q9UHD0 177 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 PCDHB10Q9UN67 800 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 N6AMT1Q9Y5N5 214 aa12.5□□□□□ -0.41
UBE2D3-228ENST00000508974 F5H5P2 479 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 J3QW42 95 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 GNGT2O14610 69 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ACOT8O14734 319 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 SURF4O15260 269 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 MLNRO43193 412 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF205O95201 554 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 AVPP01185 164 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 SELEP16581 610 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ADRA2CP18825 462 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ANOS1P23352 680 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 THBS2P35442 1172 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF362Q5T0B9 420 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 DCAF12L2Q5VW00 463 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 C1orf229Q6ZS94 237 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 TRPM8Q7Z2W7 1104 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 DCXRQ7Z4W1 244 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms