RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ZNF823P16415 610 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 TUBG1P23258 451 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 RGS6P49758 472 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 KRTAP24-1Q3LI83 254 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 ZMAT1Q5H9K5 638 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 ACSM5Q6NUN0 579 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 FAHD2BQ6P2I3 314 aaPredicted RBP13.62□□□□□ -0.23
NR1H3-227ENST00000498548 PROKR2Q8NFJ6 384 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 OR5L1Q8NGL2 311 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 SPATA3Q8NHX4 192 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 APOBEC3DQ96AK3 386 aaPredicted RBP13.62□□□□□ -0.23
NR1H3-227ENST00000498548 FAHD2AQ96GK7 314 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 MAP6Q96JE9 813 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 COG8Q96MW5 612 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 GAL3ST1Q99999 423 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 NIPSNAP1Q9BPW8 284 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 PNRC2Q9NPJ4 139 aaKnown RBP13.62□□□□□ -0.23
NR1H3-227ENST00000498548 TUBG2Q9NRH3 451 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 UBAP1Q9NZ09 502 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 CYB5R1Q9UHQ9 305 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 ATPIF1Q9UII2 106 aa13.62□□□□□ -0.23
NR1H3-227ENST00000498548 IGHV3-64DA0A0J9YX35 117 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 GYPBP06028 91 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 ACSM4P0C7M7 580 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 CLUP10909 449 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 TNFSF4P23510 183 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 CRMP1Q14194 572 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 RPL13AP3Q6NVV1 102 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 TMEM179BQ7Z7N9 219 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 ADGRG5Q8IZF4 528 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 BHLHE23Q8NDY6 225 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 OR10G2Q8NGC3 310 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 RAB39BQ96DA2 213 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 ASB9Q96DX5 294 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 CHID1Q9BWS9 393 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 C1orf21Q9H246 121 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 TMEM106BQ9NUM4 274 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 NPTNQ9Y639 398 aa13.61□□□□□ -0.23
NR1H3-227ENST00000498548 CST1P01037 141 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 AVPP01185 164 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 LCATP04180 440 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 RAP2AP10114 183 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 ANPEPP15144 967 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 ANOS1P23352 680 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 SLC3A1Q07837 685 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
NR1H3-227ENST00000498548 FBXW12Q6X9E4 464 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 C1orf229Q6ZS94 237 aaPredicted RBP13.6□□□□□ -0.23
NR1H3-227ENST00000498548 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 LNX2Q8N448 690 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 OR8G5Q8NG78 346 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 OR10AD1Q8NGE0 317 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 OR10S1Q8NGN2 331 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 OR2T4Q8NH00 348 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 ZNF420Q8TAQ5 688 aaPredicted RBP13.6□□□□□ -0.23
NR1H3-227ENST00000498548 BCAS4Q8TDM0 211 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 CANT1Q8WVQ1 401 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 ATF6BQ99941 703 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 C1QTNF5Q9BXJ0 243 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 DGCR6LQ9BY27 220 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 METTL17Q9H7H0 456 aaPredicted RBP13.6□□□□□ -0.23
NR1H3-227ENST00000498548 G6PC2Q9NQR9 355 aa13.6□□□□□ -0.23
NR1H3-227ENST00000498548 TRAV20A0A0B4J274 112 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 C5orf63A6NC05 138 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 PCMT1P22061 227 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 THBS2P35442 1172 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 LCN2P80188 198 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 COLCA1Q6ZS62 124 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 PEG10Q86TG7 708 aaKnown RBP13.59□□□□□ -0.23
NR1H3-227ENST00000498548 IQCF1Q8N6M8 205 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 ZNF283Q8N7M2 679 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 ZNF582Q96NG8 517 aaPredicted RBP13.59□□□□□ -0.23
NR1H3-227ENST00000498548 FEVQ99581 238 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 RBM4Q9BWF3 364 aaKnown RBP13.59□□□□□ -0.23
NR1H3-227ENST00000498548 MED20Q9H944 212 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 PPP1R3CQ9UQK1 317 aa13.59□□□□□ -0.23
NR1H3-227ENST00000498548 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 IQCF6A8MYZ5 107 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 F5H5P2 479 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 J3QW42 95 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 MLNRO43193 412 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 ZNF205O95201 554 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 SPARCP09486 303 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 TNFRSF1AP19438 455 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 TPTEP56180 551 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 DCXRQ7Z4W1 244 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 OR2T33Q8NG76 320 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 OR13G1Q8NGZ3 307 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 MEGF10Q96KG7 1140 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 SIGLEC11Q96RL6 698 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms