RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
VCP-207ENST00000493886 UBQLN2Q9UHD9 624 aa12.29□□□□□ -0.44
VCP-207ENST00000493886 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
VCP-207ENST00000493886 FOXJ3Q9UPW0 622 aa12.29□□□□□ -0.44
VCP-207ENST00000493886 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 GABARAPH6UMI1 98 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 LDOC1O95751 146 aaPredicted RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 PNPP00491 289 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 OPN1LWP04000 364 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 RIDAP52758 137 aaKnown RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 FOXK1P85037 733 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 EXT1Q16394 746 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 MDGA2Q7Z553 956 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 FADS6Q8N9I5 356 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 OR2Y1Q8NGV0 311 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 OR52N5Q8NH56 324 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 C7orf50Q9BRJ6 194 aaKnown RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 SLC22A13Q9Y226 551 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 IGKV1D-43A0A0B4J1Z2 117 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 ANXA2P2A6NMY6 339 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 DOK2O60496 412 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 IFNA7P01567 189 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 ANXA2P07355 339 aaKnown RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 ZNF823P16415 610 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 RAB3AP20336 220 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 GUCA2AQ02747 115 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 ZNF273Q14593 569 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 DTWD2Q8NBA8 298 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 TSEN15Q8WW01 171 aaKnown RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
VCP-207ENST00000493886 GINS4Q9BRT9 223 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 MRI1Q9BV20 369 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 ASH2LQ9UBL3 628 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
VCP-207ENST00000493886 LINC00862A6NCI5 91 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 RLN1P04808 185 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 CALCBP10092 127 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 POU3F2P20265 443 aaPredicted RBP12.27□□□□□ -0.44
VCP-207ENST00000493886 PTAFRP25105 342 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 BIDP55957 195 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 TAS2R20P59543 309 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 COTL1Q14019 142 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 TCEAL6Q6IPX3 200 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 TCEAL3Q969E4 200 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 MCHR2Q969V1 340 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 EMC6Q9BV81 110 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 EML6Q6ZMW3 1958 aa12.27□□□□□ -0.44
VCP-207ENST00000493886 WDFY3Q8IZQ1 3526 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 A0A1W2PNR3 127 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 CTDSPLO15194 276 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 GP1BAP07359 652 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 EFNB2P52799 333 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 MFGE8Q08431 387 aaPredicted RBP12.27□□□□□ -0.45
VCP-207ENST00000493886 OPN5Q6U736 354 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 RHOUQ7L0Q8 258 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 M1APQ8TC57 530 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 THRSPQ92748 146 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 ARID1AO14497 2285 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 MED12Q93074 2177 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 KDM4BO94953 1096 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 ACP1P24666 158 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 ART1P52961 327 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 PSMA6P60900 246 aaKnown RBP12.27□□□□□ -0.45
VCP-207ENST00000493886 PCGF3Q3KNV8 242 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 DND1Q8IYX4 353 aaKnown RBP12.27□□□□□ -0.45
VCP-207ENST00000493886 OR8S1Q8NH09 359 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
VCP-207ENST00000493886 ESRP2Q9H6T0 727 aaKnown RBP12.27□□□□□ -0.45
VCP-207ENST00000493886 PYCARD-AS1I3L0S3 204 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 COX5BP10606 129 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 CXCL2P19875 107 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 P2RY4P51582 365 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 PCK2Q16822 640 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 DCXRQ7Z4W1 244 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 CATSPERDQ86XM0 798 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 UEVLDQ8IX04 471 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 OR51D1Q8NGF3 324 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 DVL3Q92997 716 aaPredicted RBP12.26□□□□□ -0.45
VCP-207ENST00000493886 SLC6A15Q9H2J7 730 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 RTTNQ86VV8 2226 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 B4E171 279 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 RRP8O43159 456 aaKnown RBP12.26□□□□□ -0.45
VCP-207ENST00000493886 HTR3BO95264 441 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 FOLR3P41439 243 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 EIF1P41567 113 aaKnown RBP12.26□□□□□ -0.45
VCP-207ENST00000493886 STARP49675 285 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 AP3S2P59780 193 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 OPCMLQ14982 345 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 C2orf68Q2NKX9 166 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms