RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 IQCF6A8MYZ5 107 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 CDC42EP2O14613 210 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 TNFRSF13BO14836 293 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 SFTPBP07988 381 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 KDELR2P33947 212 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 CFHR2P36980 270 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 TRAM2Q15035 370 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 C19orf18Q8NEA5 215 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 UBE2FQ969M7 185 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 RERGLQ9H628 205 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 WDR76Q9H967 626 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 GID8Q9NWU2 228 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 COA3Q9Y2R0 106 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 SNX13Q9Y5W8 968 aa16.16■□□□□ 0.18
SMPDL3A-202ENST00000487215 A0A1B0GWJ7 208 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 J3KTA2 159 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 IMPA2O14732 288 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 SLC16A7O60669 478 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 KHDRBS3O75525 346 aaKnown RBP16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 HLA-DPB1P04440 258 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 IRF2P14316 349 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 PSMB10P40306 273 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 GATA4P43694 442 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 GPR4P46093 362 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 PDCD1Q15116 288 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 ZNF620Q6ZNG0 422 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 GLB1L2Q8IW92 636 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 TBX15Q96SF7 602 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 FNDC11Q9BVV2 318 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 SYT4Q9H2B2 425 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 TMEM100Q9NV29 134 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 AP3M1Q9Y2T2 418 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 RNF114Q9Y508 228 aa16.15■□□□□ 0.18
SMPDL3A-202ENST00000487215 WNK1Q9H4A3 2382 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 A0A087WUU8 490 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 CENPVL3A0A0U1RRI6 287 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 FAM220BPB1ANY3 271 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 P2RY10O00398 339 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 MRASO14807 208 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 FFAR1O14842 300 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 MMP9P14780 707 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 FPR3P25089 353 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 PRSS12P56730 875 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 RPL15P61313 204 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 SELENOWP63302 87 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 MAB21L1Q13394 359 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 KRR1Q13601 381 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 TBPL2Q6SJ96 375 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 ZNF730Q6ZMV8 503 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 RNF113BQ8IZP6 322 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 LINC01006Q8NI28 216 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 Q8TCH9 128 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 SSMEM1Q8WWF3 244 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 ACOT11Q8WXI4 607 aaPredicted RBP16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 LZICQ8WZA0 190 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 DYRK2Q92630 601 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 TECTBQ96PL2 329 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 KIF17Q9P2E2 1029 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 CTSZQ9UBR2 303 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 TMCC3Q9ULS5 477 aa16.14■□□□□ 0.17
SMPDL3A-202ENST00000487215 ZNF879B4DU55 563 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 FAM20BO75063 409 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 CLPXO76031 633 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 TOX4O94842 621 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 HOXA4Q00056 320 aaPredicted RBP16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 KLF10Q13118 480 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 ZBED5Q49AG3 693 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 CLEC12AQ5QGZ9 265 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 TMPRSS11FQ6ZWK6 438 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 MBOAT2Q6ZWT7 520 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 VTCN1Q7Z7D3 282 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 C1QL4Q86Z23 238 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 GATAD2BQ8WXI9 593 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 COQ7Q99807 217 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 HDHD2Q9H0R4 259 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 NMNAT1Q9HAN9 279 aaPredicted RBP16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 ACOXLQ9NUZ1 547 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 VSX1Q9NZR4 365 aaPredicted RBP16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 POLR1DQ9Y2S0 133 aa16.13■□□□□ 0.17
SMPDL3A-202ENST00000487215 SLC22A31A6NKX4 558 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 GPR137BO60478 399 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 TSPAN15O95858 294 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 IFNW1P05000 195 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 H2AFXP16104 143 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 SDHAP31040 664 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 NPY4RP50391 375 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 RAD23AP54725 363 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 PROK1P58294 105 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 HIST1H3AP68431 136 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 KCNMB1Q16558 191 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 TAF9Q16594 264 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 HIST2H3PS2Q5TEC6 136 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 PRAMEF6Q5VXH4 476 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 HIST2H3AQ71DI3 136 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 CELF2-AS1Q8N7Q2 184 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 OR11L1Q8NGX0 322 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 TBC1D15Q8TC07 691 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 ERGIC1Q969X5 290 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 HCAR1Q9BXC0 346 aa16.12■□□□□ 0.17
SMPDL3A-202ENST00000487215 MMADHCQ9H3L0 296 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms