RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OR5M11Q96RB7 305 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TBX5Q99593 518 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 OBP2BQ9NPH6 170 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TRIM36Q9NQ86 728 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 HIVEP2P31629 2446 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ABCA1O95477 2261 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 TVP23AA6NH52 213 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 E7EQL1 145 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 H3BSA7 217 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 RPL36A-HNRNPH2H7BZ11 118 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF593O00488 134 aaPredicted RBP13.57□□□□□ -0.24
CPSF3-203ENST00000475482 UPK3AO75631 287 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 TFP02787 698 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ADRA2AP08913 450 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 CD36P16671 472 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 RGS6P49758 472 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 FMODQ06828 376 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 EGR3Q06889 387 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 SPOCK1Q08629 439 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ETFDHQ16134 617 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 C10orf128Q5T292 105 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 C11orf71Q6IPW1 123 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 SLC18B1Q6NT16 456 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 KCTD18Q6PI47 426 aaPredicted RBP13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 SLC26A10Q8NG04 563 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 OR1K1Q8NGR3 316 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ZNRF4Q8WWF5 429 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 NSMAFQ92636 917 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 UFD1Q92890 307 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
CPSF3-203ENST00000475482 CDADC1Q9BWV3 514 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 ULBP2Q9BZM5 246 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 NELFAQ9H3P2 528 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 BABAM2Q9NXR7 383 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 CEPT1Q9Y6K0 416 aa13.57□□□□□ -0.24
CPSF3-203ENST00000475482 CR1P17927 2039 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 A0A1W2PPL8 197 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 SULT1C4O75897 302 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 KRT33AO76009 404 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 KRT8P05787 483 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 HEXAP06865 529 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 PAX7P23759 505 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 GBX2P52951 348 aaPredicted RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF85Q03923 595 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 GPR50Q13585 617 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 TBRG1Q3YBR2 411 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 CDONQ4KMG0 1287 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 OR2G6Q5TZ20 316 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 CLEC9AQ6UXN8 241 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 OTOSQ8NHW6 89 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 SPRYD4Q8WW59 207 aaPredicted RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 GATAD2BQ8WXI9 593 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 BCL2L2Q92843 193 aaPredicted RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 YIPF6Q96EC8 236 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 TRMT61AQ96FX7 289 aaKnown RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 ALKBH3Q96Q83 286 aaPredicted RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 DHRS9Q9BPW9 319 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF649Q9BS31 505 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 FUNDC2Q9BWH2 189 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 RBM38Q9H0Z9 239 aaKnown RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 SEC61A2Q9H9S3 476 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 FAIMQ9NVQ4 179 aa13.56□□□□□ -0.24
CPSF3-203ENST00000475482 CRNNQ9UBG3 495 aaPredicted RBP13.56□□□□□ -0.24
CPSF3-203ENST00000475482 ARPC4-TTLL3A0A0A6YYG9 625 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 J3QLW9 94 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 M0R1B8 84 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 DHHO43323 396 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 LY6G6DO95868 133 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 WNT11O96014 354 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 SPARCP09486 303 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 GAAP10253 952 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 HOXB1P14653 301 aaPredicted RBP13.55□□□□□ -0.24
CPSF3-203ENST00000475482 CPEP16870 476 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF19P17023 458 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 ALOX5APP20292 161 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 NPR2P20594 1047 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 PSMA1P25786 263 aaKnown RBP13.55□□□□□ -0.24
CPSF3-203ENST00000475482 CDKN1AP38936 164 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 KCNMB1Q16558 191 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 TSTQ16762 297 aaKnown RBP13.55□□□□□ -0.24
CPSF3-203ENST00000475482 C3orf36Q3SXR2 165 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 HIKESHIQ53FT3 197 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 AGAP6Q5VW22 663 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF544Q6NX49 715 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 LRFN4Q6PJG9 635 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 SLC22A25Q6T423 547 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 VASH1Q7L8A9 365 aaPredicted RBP13.55□□□□□ -0.24
CPSF3-203ENST00000475482 DPY19L4Q7Z388 723 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 FAM169BQ8N8A8 192 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF485Q8NCK3 441 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 THEM6Q8WUY1 208 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 ISOC1Q96CN7 298 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 C4orf36Q96KX1 117 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 OPALINQ96PE5 141 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 MRPL22Q9NWU5 206 aaKnown RBP13.55□□□□□ -0.24
CPSF3-203ENST00000475482 POLR1DQ9Y2S0 133 aa13.55□□□□□ -0.24
CPSF3-203ENST00000475482 NDUFS7O75251 213 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms