RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 FAM220AQ7Z4H9 259 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 RNF113BQ8IZP6 322 aaKnown RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 SLC25A45Q8N413 288 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 ADAMTS18Q8TE60 1221 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 ZNRF4Q8WWF5 429 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 TM4SF19Q96DZ7 209 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 FKRPQ9H9S5 495 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SIGLEC7Q9Y286 467 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 CACNA1DQ01668 2161 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 ZNF264O43296 627 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 AQP8O94778 261 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 MLC1Q15049 377 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 NIPAL3Q6P499 406 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 OR52B4Q8NGK2 314 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SHDQ96IW2 340 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 CCNL2Q96S94 520 aaPredicted RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 CDX2Q99626 313 aaPredicted RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 SLC35A3Q9Y2D2 325 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 IGHV1OR21-1A0A087WYE8 117 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 TRBV11-1A0A0K0K1C0 115 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 A0A1W2PPH5 198 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 TIAF1O95411 115 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 DAOP14920 347 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 CCKBRP32239 447 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 PRKXP51817 358 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 PRSS12P56730 875 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 LSM6P62312 80 aaKnown RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 PLEKHN1Q494U1 663 aaPredicted RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 LYSMD4Q5XG99 296 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 FAAP20Q6NZ36 180 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 OR8S1Q8NH09 359 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 ST7LQ8TDW4 575 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 THAP4Q8WY91 577 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 RTN4RQ9BZR6 473 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 UBQLN4Q9NRR5 601 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 KLHL9Q9P2J3 617 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 WISP1O95388 367 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 UBBP0CG47 229 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 IFNGR1P15260 489 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 FOXK1P85037 733 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 ACTBL2Q562R1 376 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 LRRC28Q86X40 367 aaPredicted RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 ZNF595Q8IYB9 648 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 C15orf54Q8N8G6 183 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 MED29Q9NX70 200 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 UBE2QL1A1L167 161 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 GOSR2O14653 212 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 POU2F2P09086 479 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 DYRK1AQ13627 763 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 LPCAT3Q6P1A2 487 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 MDGA2Q7Z553 956 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 SLC35F2Q8IXU6 374 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 DERL3Q96Q80 235 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 VN1R1Q9GZP7 353 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 M0R036 132 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 FMO6PO60774 539 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 MPZL1O95297 269 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 NSA2O95478 260 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 RLN1P04808 185 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 FOLR2P14207 255 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 HTR1FP30939 366 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 EMP2P54851 167 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 PPIAP62937 165 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 SLC36A2Q495M3 483 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 LRRC37A5PQ49AS3 106 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 TMPRSS12Q86WS5 348 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 NUBPLQ8TB37 319 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 CNN2Q99439 309 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 ALG12Q9BV10 488 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 PTGES2Q9H7Z7 377 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 NOX3Q9HBY0 568 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 TESQ9UGI8 421 aaKnown RBP11.1□□□□□ -0.63
USP11-206ENST00000469080 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
USP11-206ENST00000469080 FER1L5A0AVI2 2057 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 SULT2B1O00204 365 aa11.09□□□□□ -0.63
USP11-206ENST00000469080 TBX19O60806 448 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms