RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	GSX2	Q9BZM3	304 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	RBM38	Q9H0Z9	239 aa	Known RBP	10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	ESRP2	Q9H6T0	727 aa	Known RBP	10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	CRLF2	Q9HC73	371 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	GPR35	Q9HC97	309 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	TMEM38B	Q9NVV0	291 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	MALT1	Q9UDY8	824 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	RSL24D1	Q9UHA3	163 aa	Known RBP	10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	POLR1D	Q9Y2S0	133 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	UGT2A1	Q9Y4X1	527 aa		10.51	□□□□□ -0.73
CTNS-205	ENST00000467663	FREM1	Q5H8C1	2179 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	IGKV1D-43	A0A0B4J1Z2	117 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663		J3QLW9	94 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	OGG1	O15527	345 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	PLPP2	O43688	288 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	GPRIN2	O60269	458 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	UPK3A	O75631	287 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	LYZL6	O75951	148 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ADRA2A	P08913	450 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	HSMCR30	P0CW71	290 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	PAX1	P15863	534 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	CD36	P16671	472 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ZNF19	P17023	458 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	MPG	P29372	298 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	RIDA	P52758	137 aa	Known RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ROR2	Q01974	943 aa	Known RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	SCRN3	Q0VDG4	424 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ECH1	Q13011	328 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	EIF2B1	Q14232	305 aa	Known RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	CEACAM16	Q2WEN9	425 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663		Q5PR19	223 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	TIMM23B	Q5SRD1	257 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	TSPO2	Q5TGU0	170 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ALKBH2	Q6NS38	261 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	KRT77	Q7Z794	578 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	WDFY1	Q8IWB7	410 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	PHC2	Q8IXK0	858 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	GATAD2B	Q8WXI9	593 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	TMIGD2	Q96BF3	282 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	C18orf12	Q96KH6	178 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	OPALIN	Q96PE5	141 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	TBX5	Q99593	518 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ABHD6	Q9BV23	337 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	FUNDC2	Q9BWH2	189 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	GSX1	Q9H4S2	264 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	SLC7A10	Q9NS82	523 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	NDUFB11	Q9NX14	153 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	TAS2R16	Q9NYV7	291 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ATPIF1	Q9UII2	106 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	ENPP5	Q9UJA9	477 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	COPS3	Q9UNS2	423 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	RNF115	Q9Y4L5	304 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	CEPT1	Q9Y6K0	416 aa		10.5	□□□□□ -0.73
CTNS-205	ENST00000467663	DPRX	A6NFQ7	191 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	CCDC160	A6NGH7	325 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	ACOD1	A6NK06	481 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	OR5H1	A6NKK0	313 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	ZNF878	C9JN71	531 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	SLC22A1	O15245	554 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	GABARAP	O95166	117 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	SERPINA3	P01011	423 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	HLA-DPB1	P04440	258 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	CD3E	P07766	207 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	GABRA5	P31644	462 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	LIPA	P38571	399 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	CCR9	P51686	369 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	OR12D2	P58182	307 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	GRB2	P62993	217 aa	Known RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	HIST1H3A	P68431	136 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	PPA1	Q15181	289 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	SGCA	Q16586	387 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	TST	Q16762	297 aa	Known RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	PHYHD1	Q5SRE7	291 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	HIST2H3PS2	Q5TEC6	136 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	GPR107	Q5VW38	600 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	HIST2H3A	Q71DI3	136 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	DCXR	Q7Z4W1	244 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	BIVM	Q86UB2	503 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	SLC22A24	Q8N4F4	322 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	ST7L	Q8TDW4	575 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	TMEM171	Q8WVE6	324 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	RNF133	Q8WVZ7	376 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	PHYHIP	Q92561	330 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	ITFG2	Q969R8	447 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	NABP1	Q96AH0	204 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	MOV10	Q9HCE1	1003 aa	Known RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	ZNF701	Q9NV72	531 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	GNG8	Q9UK08	70 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	IKZF2	Q9UKS7	526 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	PRR14L	Q5THK1	2151 aa		10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	FLNA	P21333	2647 aa	Known RBP	10.49	□□□□□ -0.73
CTNS-205	ENST00000467663	NF1	P21359	2839 aa		10.48	□□□□□ -0.73
CTNS-205	ENST00000467663	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.48	□□□□□ -0.73
CTNS-205	ENST00000467663		H3BSA7	217 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms