RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 HLA-GP17693 338 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 RCC1P18754 421 aaPredicted RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 COL9A1P20849 921 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 NPY4RP50391 375 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 RIDAP52758 137 aaKnown RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 SGCAQ16586 387 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 FNDC7Q5VTL7 733 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF615Q8N8J6 731 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 OR51F2Q8NH61 342 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 FGGYQ96C11 551 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 NRIP2Q9BQI9 281 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 NICN1Q9BSH3 213 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 A0A1W2PPE3 182 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 HCRTR2O43614 444 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 UTS2O95399 124 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 SERPINA5P05154 406 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 NFATC4Q14934 902 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM196Q5HYL7 178 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 WDR92Q96MX6 357 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 RCC2Q9P258 522 aaKnown RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 A0A0J9YY10 115 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 APODP05090 189 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 NME2P22392 152 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 GNALP38405 381 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 ARRB1P49407 418 aaPredicted RBP11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 FMODQ06828 376 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 C1orf61Q13536 156 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 TDGQ13569 410 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 PEA15Q15121 130 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 OR11A1Q9GZK7 315 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SLCO5A1Q9H2Y9 848 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 UBQLN4Q9NRR5 601 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 CENPMQ9NSP4 180 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 PCOLCE2Q9UKZ9 415 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 ATXN7L1Q9ULK2 861 aaPredicted RBP11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SCDO00767 359 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SSX5O60225 188 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 CLPSP04118 112 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 IFNA6P05013 189 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SFTA3P0C7M3 94 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 LPAR6P43657 344 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 EIF1AXP47813 144 aaKnown RBP11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 PPT1P50897 306 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 GPM6BQ13491 265 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 MEF2DQ14814 521 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 EMC4Q5J8M3 183 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 NAA11Q9BSU3 229 aaPredicted RBP11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SEC11CQ9BY50 192 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
CLCNKA-204ENST00000464764 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 LRP3O75074 770 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 DUS4LO95620 317 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 RNH1P13489 461 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 IL11P20809 199 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 CXCR1P25024 350 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 CD80P33681 288 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 F2RL1P55085 397 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF117Q03924 483 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 DMBX1Q8NFW5 382 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 SLC37A2Q8TED4 501 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 C14orf79Q96F83 325 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 PNO1Q9NRX1 252 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 HHLA2Q9UM44 414 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 RP1P56715 2156 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 FBXO24O75426 580 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 BGLAPP02818 100 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 NR0B1P51843 470 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 COX15Q7KZN9 410 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 GPR119Q8TDV5 335 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF775Q96BV0 537 aaPredicted RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 OR10C1Q96KK4 312 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 GAL3ST4Q96RP7 486 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 CERS4Q9HA82 394 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 TDRD6O60522 2096 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM269A0A1B0GVZ9 245 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 DBX1A6NMT0 343 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 METTL12A8MUP2 240 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 RNASEK-C17orf49H0YIS7 233 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 PHYHO14832 338 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms